| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4169 |
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| Symbol | |
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| ID | 5199982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4585554 |
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| End bp | 4586993 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583723 |
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| Product | amidase |
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| Protein accession | YP_001264647 |
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| Protein GI | 148557065 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.291168 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.211672 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTTT CCTTTTCCGA ATATCGCGGG CTCGACGCCG TCGCCATGGC GGATCTGGTC
CGATCGGGTC AGGTGACCCC GGCCGAGCTG CTCGAAACCG CCATCGCCCG GGCCGATGCG
GTCAACCCGG TGCTCAACGC GATCTGCCAT CCGATGTACG ATGCCGGCCG AGCCGACGCG
GCGGCGGCTC CCTTGTCGGC GCCGCTCGCC GGCGTTCCCT TCCTGTTGAA GGACATCACC
ACCCATCGGC AGGGCTGGCC GATGAGCAGC GGCAGCCTGG TGATGCGCGA CCAGGTGTCG
AGCTTCGACA ACGAGGTGGT GAAGCGCTAT CTGGCCGCGG GGCTGGTCCT GTTCGGCCGC
ACCACCACGC CCGAGTTCGG CTATGCGGCG AGCGCGGAAT CCCGCTTGTT CGGGGCGACG
CGGAATCCCT GGGACCCGTC ACGGACGGCG GGAGGCTCCT CGGGCGGGGC GGCGGCGGCG
GTCGCGGCGG GGATCGTTCC CGCCGCACAG GGCGGCGATG CCGGCGGCTC GATCCGCATC
CCGGCCTCCT TCTCCGGCCT GTTCGGGATC AAGCCGACCC GCGCACGGGT GCCGGCGGGG
CCCGCCCATG GCGCCTTCCT CGGTTTCTCG ACCACCCATG TGCTCAGCCG CTCGGTGCGC
GACAGCGCGC TGCTGCTGGA TGTGACGCAT GGGCCCGACA TCGGCGCGCC TTATGCCGCC
CCGCCGCCGC GCCAGGGCTT CCTCGCCGCG ACGCAGACCC GGCCAAAGCG GTTGCGCATC
GCGCTGCAGC GCCGCGCTTT CGACGACACG CCGGTCGAGG CCGACTGCAT CCGCGCGATC
GAGGAGACCG CCAGGCTGTG CGAGGAGCTG GGTCATGAGG TGATCGAGGC CGACCTGCGC
TTCGACCATG GCCGGCTGCG CGAAATCTAT TTCATCGTCT GGCCCATGCT GGTCATGCAC
AGTCTCGACC AGCATGCCCG TGCGACCGGC CGGCCGGTGC GGATGGAGGA GCTCGAAACC
TATGTCGCGC GGCTGGTCGA CGACGCGCGG CGGGCGGGCG CCGGCGACTT CATCGCCGGG
CTGGAGAGCA TGACCGAGGT ATCGCGCTCG TTCCGCGCCC AGTCCGACAT GTTCGACCTG
GTGCTGTCGC CGACGACCGC GCAGGTCGCG CCGCGGATCG GCATGCTCGA TCCGTCCAAC
CCCGATCAGG CTCAGCTCGA TGCCGCGCTG GCCGCATCGG TGGCCTTCAC CCAGATCCAC
AATGTGACGG GTCAGCCGGC CGCCTCGATC CCGCTCTACT GGACCGAGCA GGGCATTCCG
ATCGGATCCC AATTCGCTGC CCGCTTCGGC GACGAGGAGA CGATCTTCGC ACTGGCGGCC
CAACTCGAGG AAGCTCGTCC CTGGTTCGAA CGCACCCCGG ATTTGTCCGT GTTAGCGTAA
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| Protein sequence | MALSFSEYRG LDAVAMADLV RSGQVTPAEL LETAIARADA VNPVLNAICH PMYDAGRADA
AAAPLSAPLA GVPFLLKDIT THRQGWPMSS GSLVMRDQVS SFDNEVVKRY LAAGLVLFGR
TTTPEFGYAA SAESRLFGAT RNPWDPSRTA GGSSGGAAAA VAAGIVPAAQ GGDAGGSIRI
PASFSGLFGI KPTRARVPAG PAHGAFLGFS TTHVLSRSVR DSALLLDVTH GPDIGAPYAA
PPPRQGFLAA TQTRPKRLRI ALQRRAFDDT PVEADCIRAI EETARLCEEL GHEVIEADLR
FDHGRLREIY FIVWPMLVMH SLDQHARATG RPVRMEELET YVARLVDDAR RAGAGDFIAG
LESMTEVSRS FRAQSDMFDL VLSPTTAQVA PRIGMLDPSN PDQAQLDAAL AASVAFTQIH
NVTGQPAASI PLYWTEQGIP IGSQFAARFG DEETIFALAA QLEEARPWFE RTPDLSVLA
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