| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4164 |
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| Symbol | |
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| ID | 5196710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4580848 |
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| End bp | 4581555 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640583718 |
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| Product | 3-oxoacid CoA-transferase, A subunit |
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| Protein accession | YP_001264642 |
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| Protein GI | 148557060 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.29894 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGGA AGATATATGA GGACGCGCGC GCCGCGCTCG ACGGGCTGCT CCGCGACGGC
ATCACCATCG CCGCCGGGGG CTTCGGCCTG TGCGGCATAC CGGAGACGCT GATCGACGAG
GTGCGGCGCA GCGCGGTCGA GCGGCTCACC ATCATCTCCA ACAATGCCGG GATCGAGGAT
TTCGGCTTGG GCAAGCTGCT GCAGACGCGG CAGGTCGCGA AGATGATCAG CTCCTTCATG
GGCGGAAACC GCGAGTTCGA GCGGCAGTAT CTGGCCGGGG AGGTCGAGGT GGAGTTCTGC
CCGCAAGGGA CGCTGGCCGA GCGCATTCGC GCGGGGGGAG CTGGGATTCC CGGCTTCTAT
ACACGCACCG GCGTCGGCAC GCTGATCGCG GAAGGCAAGG AGGTGCGGAT GTTCGGCGAT
ACGGCCTATC TGCTCGAAAG CGGGCTTCGC GCCGATGTCG CGCTGGTCAA GGCGTGGAAG
GGCGATCCGC ACGGCAATCT GCTGTTCCGC AAATCCGCGC GCAACTTCAA TCCGGTGGTC
GCCACCTGCG GCCGGGTGAC CGTCGCGGAG GTCGAGGAAC TGGTCGGCCC CGGCGAGATC
GAGGCGGACC TGGTCCATAC GCCCGGCATC TATGTCGACC GCCTGATCCT GGCGACGAGT
AACGAGAAGC GCATCGAACG GCTGACCGTG CGGGAGGAGG CGGCATGA
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| Protein sequence | MARKIYEDAR AALDGLLRDG ITIAAGGFGL CGIPETLIDE VRRSAVERLT IISNNAGIED
FGLGKLLQTR QVAKMISSFM GGNREFERQY LAGEVEVEFC PQGTLAERIR AGGAGIPGFY
TRTGVGTLIA EGKEVRMFGD TAYLLESGLR ADVALVKAWK GDPHGNLLFR KSARNFNPVV
ATCGRVTVAE VEELVGPGEI EADLVHTPGI YVDRLILATS NEKRIERLTV REEAA
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