| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4160 |
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| Symbol | |
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| ID | 5198120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4575639 |
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| End bp | 4577711 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640583714 |
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| Product | Pyrrolo-quinoline quinone |
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| Protein accession | YP_001264638 |
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| Protein GI | 148557056 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0349949 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTT CGAAACGAGC CATGACGATG ACCGGCGTGG CGGCGGCCCT GATCGCCATG
GGCTGCGCGG CGGTCGGCGG GTCAAGGCCG CCGGTGCAGT GGGAATATCG CGGCGGCAAT
GCCGAAGGGC AGCATTTCAG CCCGCTGGAG CAGATCGACG AGCAGAGCAT CGGCCGGCTC
GGCCTGGCCT GGTACGCCGA CATCCCCTCC CCCGACGGCC CGGTCGGCAC GCCGATCGTC
GTCGACGGGG TCAGCTACGT CATCAGCACG CTCAACATCG TCTATGCCCA CGACCTGCGC
ACCGGCAAGC TGCTGTGGGC GTTCGATCCC AAGGTCCGCT TCGGCAGCGC GCTGCTCGCT
TCCTGGGGCA ACCGGATCAC GCGCGGCCTG GGCTATGGCA ATGGCAAGAT CGTGCTGACC
ACCGGCGATT GCCGGGTGAT CGCGATCGAC GCCAGGACCG CGGCCAAGCA GTGGGAGGCG
CGCGCCTGCC CCGATCAAGG CGATTATACG ATCACCTCCG CCCCGCGCGT CGGCGGCGGC
AAGGTGTTCG TCGGGCCCAA CAATGCCGAT CTTGGCACCG CGCGCGGCTA TGTCGTGGCG
TTCGACCTGG AGACCGGCAA CCGGCTCTGG CGCTTCGACA CCATCCCCGA CGGCCCCGAC
CCGACCGACC CGACCATGAA GATGGCCGCG AAGACCTGGG ACCCGGTGTT CCTCCGCACC
GCCGCGGGCG GCAGCGTCTG GGAGGACATG ACCTATGATC CGGTCACCAG GCTGCTCTAC
ATCGGCGTCG GCGGCGCGAC CCCCTGGAAC CCGATGAACC GTGGCGCCAG ACGCGGCGAC
GAGCTGTTCA CCAACTCGAT CGTCGCGGTG AAGGCCGACA CCGGCGAATA TGTCTGGCAC
TACCAGACCA CGCCCGACGA CGGCTGGAAC CTCGAGCCGA CCATGCCGAT GGTGATCGCC
GACATGGAGA TCGACGGCCG AAAGCGCCGG GTGGTGATGG AGGCGCCGAA GAACGGCTTC
TTCTACGTCC TCGACGCCCT CGACGGAACG CTGGTCAACA AGCCGAACAA CTTCGTGCCG
GTGAACTGGG CCAAGGAGAT CGACGGCAGG ACCGGCCGTC CGGTGATGAA CCCGGAGGCG
GAATATTGGA AGAAGGACGG CGGCGCCGTC GTCTTCCCCG GCCCGCTCGG TGCCCACAAC
TTCAACCCGA TGAGCTATGA TCCGGGCACG GGGCTGGTCT ACATCCCGAC GCTCGACCTG
CCGACCCAGA TGGAGATCGA CAAGACCGCC TCGGTCGGTT CGTCGGTCGG CGGCGCGACC
TACACCCGTT ACCTGAGCCA CATGGATCAG GCCAAATGGC CGCTCGTCGC CTGGGATCCG
ATCCGGCAGA AGGCGCGCTG GCAGACCGCC GGCACCATCC CGCTGGGCAG CGGCGTGCTG
TCGACCGCCG GCAACATCGT CTTCCAGGGT GGCGCCGACG GCGTGCTGCG CGCCTATCGC
GCCTCGGACG GCGTGCAGCT CTGGTCGTTC AAGACGGGGT CGGCCATCGC CGCCGCGCCG
GTGACGGTCG ACATCGACGG GGTCCAGACG CTGATCGTCG TCGCCGGCCC GCCCGGCACC
TCGGCCGCCG TCCGCGCCTT TCCGGGCCTC TATGGACGGG CGGACACCAA CGGCCCGCCC
CGGATCTTCG CGTTCCGCCT CGACGCCAGG GCAGCCGCGC CGGCGATGAC CACAGCCTCG
GCCAGGTCCT TCGCCAAGCC GCCCTATCCG CGCCCCGACG CGGCGCTGGC GGCCAAGGGC
AGGATGCTGT TCGAAACCCG CTCCTGCGAC CTGTGCCATG GCGCCGGCGC CCATGCGGTG
ACGGGATCGG TGCCCGACCT GCGACGCGCC TCGATCGCGA CCTATGACGG GTTCGAGGGC
ATCGTCCGCG GCGGCGCGCT GCAGGACAAG GGCATGCCGA TGTTCTTCGA CCTGGTAACC
GAGGAGGAAT CGGGCGCGCT GCGGGCCTTT GTCCTCGACG CCGCCTGGGA CGCCTATCAG
GCGCAGAAGG GCCGGACGAC CGCATCGCGC TGA
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| Protein sequence | MKISKRAMTM TGVAAALIAM GCAAVGGSRP PVQWEYRGGN AEGQHFSPLE QIDEQSIGRL
GLAWYADIPS PDGPVGTPIV VDGVSYVIST LNIVYAHDLR TGKLLWAFDP KVRFGSALLA
SWGNRITRGL GYGNGKIVLT TGDCRVIAID ARTAAKQWEA RACPDQGDYT ITSAPRVGGG
KVFVGPNNAD LGTARGYVVA FDLETGNRLW RFDTIPDGPD PTDPTMKMAA KTWDPVFLRT
AAGGSVWEDM TYDPVTRLLY IGVGGATPWN PMNRGARRGD ELFTNSIVAV KADTGEYVWH
YQTTPDDGWN LEPTMPMVIA DMEIDGRKRR VVMEAPKNGF FYVLDALDGT LVNKPNNFVP
VNWAKEIDGR TGRPVMNPEA EYWKKDGGAV VFPGPLGAHN FNPMSYDPGT GLVYIPTLDL
PTQMEIDKTA SVGSSVGGAT YTRYLSHMDQ AKWPLVAWDP IRQKARWQTA GTIPLGSGVL
STAGNIVFQG GADGVLRAYR ASDGVQLWSF KTGSAIAAAP VTVDIDGVQT LIVVAGPPGT
SAAVRAFPGL YGRADTNGPP RIFAFRLDAR AAAPAMTTAS ARSFAKPPYP RPDAALAAKG
RMLFETRSCD LCHGAGAHAV TGSVPDLRRA SIATYDGFEG IVRGGALQDK GMPMFFDLVT
EEESGALRAF VLDAAWDAYQ AQKGRTTASR
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