Gene Swit_4155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4155 
Symbol 
ID5199556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4569757 
End bp4571154 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content72% 
IMG OID640583709 
Productamine oxidase (flavin-containing) 
Protein accessionYP_001264633 
Protein GI148557051 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1231] Monoamine oxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.326684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0591967 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGGGA TGGTTGTCGG CCGGCGCGGC GTGATCGCGG GCGGGGTCGG GCTGTTGGCG 
GGGGCTTCGG CGAGGCCGAC CGTGGCGGCC GATCGGCCGA TCGACGTGCT GGTGATCGGC
GGGGGTCTCG CCGGCCTGAT CGCCGCGCGC GACCTTGCCA AGGACGGGCA TCGCGTCCTG
ATGCTCGAAG CGCGGCCCCG GCTCGGCGGC CGGGTCGCCT GGGATCAGCT TGCCGGGCAG
GCGGTCGACA GCGGCGGGAC ATGGTTCCAC TGGCACCAGG CGGCGATCTG GCGCGAAGTG
CAATGCTACG AACTAGAGGT GGTCGAACGG CCGGTTGCCG ACCGCTATTT CATCGGGGTC
GGCGGCGCCT TCCGCGCGAT GACGCCGGAG GAACTCGACG GCCGACTGCG GCGCGGCCTC
GCCGCCTTCT GGGGTGATCC CGCGCTTCAG GCGGCGCTCG CCACCCCTTT CGCCGTCCAG
GCCAGCGGCG ATCGCCTCGC CGCGCTCGAT CGGATGTCGG TCGAGGACCG ACTGCGCGCG
ATCCGGCTCG ATCCGGTCGA CGATAGCGCA CTGCGGGCGA TCTTCAGCGA TTTCGGCCGG
CCGCTCGATC AGGTGAGTCT TGCCTGGGCG ATGCAGCGCA TGGCCAACGG CCTATGGACC
TATGAGAGCT TCATGGCGCT GTTCGCGGTC TATCGGCTGC GCGGCACGAT GCGTGCGCTG
TGCGAGGCGA TCCGTGCCGA CGGCGGGTTC GATCTTCGGC TCGACGCGCC GGTGACGCAG
GTGGTGCAGG GCGCCGGGGG CGTTTTGGTC CGCACCGCCG ACGGCACGGC CTTCGCCGCC
CGCGCCGCGG TGGTCGCCAC CCCGGTCGAG GCGTGGCGCG CGATCCGCTT CTCGCCAGAA
CTTCCCGCCG ATCATCGCCA GGCGGCGGCC GAGGGCATGG CCGCGCCGCG CCTCTGCAAC
TTCATCCTGC ATGTGCGGGG CCTGCCGGGG GTGGTGAACA GCTTCGCGCC AGCCGGCATC
GAGCCGTTCG AGTTCACCTT CACCCACAGC ACCATCGACG ACGGCCAGTT GCTGTCGGCC
TATGCGATGG AGGGCGCGAT CGGCGTTCGT GACGGCGCGG CGCGGCTGGA GACAGCGCTG
CGCCGCTTCG TCCCGGAGGC TCGTCTGGCC GGCTTCGTCG GCCATGACTG GGGCCGCGAG
CCCTTCTCGC TGGGCGGCAG CGGATCGCTC AAGCTCGGGC AGATGGCCCG CTTCGTCGAC
CGGCTCGACC GGCCGATCGG GCGGCTGTGC TTCGCCGGGG CGGACTTCGC CCCGCAATTC
GCCGGCTTCC TGACCGGAGC GATCGAATCC GGCGCCCGCG CGGCACGCCG GATCGGCGGG
ATTCTGGGGC GGGGCTGA
 
Protein sequence
MGGMVVGRRG VIAGGVGLLA GASARPTVAA DRPIDVLVIG GGLAGLIAAR DLAKDGHRVL 
MLEARPRLGG RVAWDQLAGQ AVDSGGTWFH WHQAAIWREV QCYELEVVER PVADRYFIGV
GGAFRAMTPE ELDGRLRRGL AAFWGDPALQ AALATPFAVQ ASGDRLAALD RMSVEDRLRA
IRLDPVDDSA LRAIFSDFGR PLDQVSLAWA MQRMANGLWT YESFMALFAV YRLRGTMRAL
CEAIRADGGF DLRLDAPVTQ VVQGAGGVLV RTADGTAFAA RAAVVATPVE AWRAIRFSPE
LPADHRQAAA EGMAAPRLCN FILHVRGLPG VVNSFAPAGI EPFEFTFTHS TIDDGQLLSA
YAMEGAIGVR DGAARLETAL RRFVPEARLA GFVGHDWGRE PFSLGGSGSL KLGQMARFVD
RLDRPIGRLC FAGADFAPQF AGFLTGAIES GARAARRIGG ILGRG