Gene Swit_4153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4153 
Symbol 
ID5199554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4567978 
End bp4568394 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content62% 
IMG OID640583707 
Producthypothetical protein 
Protein accessionYP_001264631 
Protein GI148557049 
COG category[R] General function prediction only 
COG ID[COG3631] Ketosteroid isomerase-related protein 
TIGRFAM ID[TIGR02096] conserved hypothetical protein, steroid delta-isomerase-related
[TIGR02246] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.870281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.17015 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATC CTCACAATCT GAAGCTCGTC GAACGCGTCA TCGGCGCCTG GGAGACCAGG 
GACAGCCAGG CCTTTTTCGA GCTGTTCCAT CATGATGTGG TCTATGACGA CGTGCCGCTG
GGCAAGGTCA TGAAGGGGCA TGACCAGTTC CGCGAATTCT ACGAAACGAG CATCATCGCC
TTCCCCGACA TCGCCATGAA GCTGGTGGCC GCTACCGCCG ATGCCAGGGC CGGCGGCGCG
GAATGGACGC TGTCGGGCAC CTTCACCGGC GAAACCGAGC TGCTGGGCAA GCCGACCGGC
AAGCGCTTCG AGATCCGCGG CGCGTCCTTC CTGCGGTTCG AAGACGGCAA GATCAGCTAT
CTCGCCGATT ATTGGGACAT GGTCGCGCTG TCGACGCAGC TCGGCATCGG CGGCTGA
 
Protein sequence
MSDPHNLKLV ERVIGAWETR DSQAFFELFH HDVVYDDVPL GKVMKGHDQF REFYETSIIA 
FPDIAMKLVA ATADARAGGA EWTLSGTFTG ETELLGKPTG KRFEIRGASF LRFEDGKISY
LADYWDMVAL STQLGIGG