| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4147 |
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| Symbol | |
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| ID | 5197364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4560187 |
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| End bp | 4561182 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583701 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001264625 |
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| Protein GI | 148557043 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.277047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.903101 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTT GGGCTCAGCA GATGCAACTC ACCGCCGGCG ATGCGGTCTT CACCGGCCCG
GATGTCGCTC TGATGCGCAC CCTGATCGCA GACGAGACGA CGGACGCGCA CGGCTGCCCC
GGCCTGTCGC TGATGGACCA GGCGCGAATC GCCGCCGACG CGGCCGGCCC CGCGCTGATC
GACCGCGTGT CGCAGCCGCT CGGCCGCTAC GGCCAGGCCG GATCGGCGAT CCTCACCTCC
TCGACGCTGC GGGTCGCGCT CGCCTCGATG AACACGATCG CCCCGCTGCT GAACCTGCGA
CACGAGCTGG TGCTCGCCTC CTGCTCGGGC GACGGCGTGG TGCTGTTCCG GCCGTTCTCC
GGGATCGACG CGGCGGCTCG GGACGCGCTG CTGCCGCTTG ACGCGGCCAA GGTCGCGCTG
TTTCTCGTCC AGCTTCTCGA CGGCACCGAC AGGACCGTCC GCCTCGTCGC CCCACCCCGC
TGGATCGCCA GCTTCGCACG ATCGCTGATA TTGGCCGATC GGGTCGAACT GATCGAGGGC
GACATGTTCG AAATCCGCGT ACCCGGCCCG TCCGCAACCA TGCCGTTGCC CGGCCGCTGC
GTCGCCGGCC ATGCCCGTTG GATGCGCGCC TGCATCCGCA CCATCCGCGC CATGGTCGAG
GATCGGCTGC TGGAAAGCGT GCGGCGGCTG GTCAACACGG CGACCGACGA CGCCCCGTCG
TTGAGCGACG TCGCCGCGCG CCTGCATCTC TCGGCACGCA CGCTGCGCCG GCGGCTGGCC
GATCGCGGGG TCAGCTTCAT GCGGATCGTC GACGAGGAGC GGCGCAGCCT GGCCCTACAA
TATGTGATGG GCGGCGAGAT GACGGTGGAA TCGATCGCCG AGCGGCTGGG TTACAGTGAG
AGCGCCAATT TCCGCCACGC CTTCCGCCGC TGGACCGGCT CCTCGCCACG CAACTATCTG
GCAAGCAGCC AGATGCTCGA GGCCGTCCGA GCCTGA
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| Protein sequence | MTAWAQQMQL TAGDAVFTGP DVALMRTLIA DETTDAHGCP GLSLMDQARI AADAAGPALI
DRVSQPLGRY GQAGSAILTS STLRVALASM NTIAPLLNLR HELVLASCSG DGVVLFRPFS
GIDAAARDAL LPLDAAKVAL FLVQLLDGTD RTVRLVAPPR WIASFARSLI LADRVELIEG
DMFEIRVPGP SATMPLPGRC VAGHARWMRA CIRTIRAMVE DRLLESVRRL VNTATDDAPS
LSDVAARLHL SARTLRRRLA DRGVSFMRIV DEERRSLALQ YVMGGEMTVE SIAERLGYSE
SANFRHAFRR WTGSSPRNYL ASSQMLEAVR A
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