| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4140 |
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| Symbol | |
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| ID | 5198493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4547725 |
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| End bp | 4549926 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640583694 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001264618 |
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| Protein GI | 148557036 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGAGA ATGATGATTT CCGGAGGATG TTGAGAAGTT CGCTGGTCGC GGGAATCTCT
GGCGTCCTCA TCTGCGCCGG CTCGCCGACG CTCGCCCAGG CGGCCACGGC ATCGTCGGAT
GAAGGCCAAG CGCGGGCGAG CGATGGCAGT CAACTCGGCG ATATCGTCGT CACGGCCCAG
CGGCGCAGCC GCGCCGAAAC GGCGCAGCGC GTGCCCATCG CGATCACCGC CGTGTCGGGC
CGGCAGCTCG AGGAGATGCA TGCGCTCACC CTGACCGACG TTGGCCGGGT GGCGCCGAAT
GTCTCGTTGA CGCCGAGCGG CACCTTTCCG GGGACGGCCA ATTTCCTCAT CCGCGGCATT
GGCGTCAACA CCAGCGATCC CTCGGCCGAG CCAGCGGTCG GCGTGTTCGT CGACGGCATG
TATTATGGCG TGAACCTGGG CGTAGTGACC GATGCCTTCG ATCTGGAGTC GGTCGAGATA
TTGCGCGGCC CGCAGGGGAC GCTTTTTGGC CGCAATGTGA CCGGCGGCGC CGTCGTTATG
CGGAGCCGCC GCCCGAGCGG CGAGTTCGGC CTTCAGGGCA AGGTCAGCTA TGGCAATTTC
AACCAGATCA GCGGTGCCGC GTCGGTCGAG GGGCCATTGA TCAAGGACGT GCTGAACGCG
AAGGTCGCGA TCATGTCCAA TAGCAACAAC GGGTTGTTCG CGAACGCCGC CAATCCCGGC
AATCGCATCG GGCGACACAA TGATCTGATC GTCCGCCCGA TAATGGAGTT CAAGCCAAGC
GACCGGCTGA CGCTGACGCT GATCGGGGAG ATCGGCCGGA TGGACGATTA TGGGACGCCG
TCGATCAACG TCTTCAACAA TGCCGGCGCG CCGATCCCTT CGGGCAAGTT CATTCTGTCG
AGCGATTTCG ACGCGCACAG CCAGCAGCGC TGGAAGCATG TCATCCTTGA GGGGGCCTAC
GAAGTCCCCA ATGGCACGAT CAAGGCGACC TTGACCGCGC GGAAGATCAG GACGTCTTTC
GAGACCGACG TCGATGCGAG CTCCGCGCAG ATATTCTCGT TCGTCGCGCC GACCGGGCTC
CACCAGCATC AGAAATCCGC CGAGATCATC TATAACGGCA AGTTCGGAGA TTATTTCGAA
CTGACCGCCG GCGGAAATTA TTTCCAGCAG ATGGCGAATT ATTCCGAGGC CAGAAGCCTT
AACGGCGGGG CCTCGCGTCC AGTCAGCGAC GGAATCCTTC ATCAGAAGAC CGGCGGAGTC
TTCGCGCAGG GCGATGCGCA TTTCGGCACC GTGACGATCA CGGCAGGCGG CCGCTACACG
ATCGACCACA AGGCGGTGAT GACCGCGGCG CTCGGCGGGT GCAGCCTGGA CGGCACGGTC
TGCAACTATG CGTTCAGCAA TGCCCACACC TGGCGCGATT TCACGCCGAA GGCCGGCATT
CGCTGGCAGC CGACCAACGC GCTGCAGTTC TATTTCACCT ATACGAAAGG CTTCCGCGGC
GGGGGATATG GTCTGCGGAA CTCGCCTGGC GTGCTGCCCG GGCCGTATAA TCCCGAGAAG
GTCGACGCTT ATGAGGTCGG CGCCAAATCG GAATGGTTCG ATCGTCGGCT TCGCGTCAAC
ATGGCGCTGT ACCGCAACAC CTATGACGAC CTGCAGCGGC TGGTTCAGGA TTTCAATCTG
GTGCAGCGCA CGCTCAACGC GGCATCGGCG CGGATCCAGG GCGCCGAGAT CGAGATCGCC
GCCATACCGG TCCGCAATCT GACGTTGAGC GGTTCGGTCG GCTATACCGA TGCCAAATAT
CTGGCGTTCA ACAATCTGGA TTTGACCGGT GACAAGGTGC CCGATCCCCT GCTCGCCAAG
CGGCTCCTTC TGTCGCAGGC GCCCAAGTGG AACTATAATC TGACAGCCAG TTACGACGTT
CCGATCGGTG ATGCCGGCAA GCTGAACTTC CGGGGCAATT ACTATCACCT CGGAAAGCGC
GCGAACGATG ATCTAAACAA GGCGATCCTA CCGTCCTACG GCCTGCTAGA CGCCAGCGTC
AGCTGGTCGT CCGCGGACGA CCGCTACAAG ATATCGGTGT TCGGAAAGAA TCTGGCCAAC
AAGCTGGCCT ATGCCAATGG CGGCACGGTG AGTTCGACTT TCGAGTCTCT CCCGCTGTTG
CCGCCGCGCC GATATGGCGT CGAAGTCTCC TTCAAGCTGT AA
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| Protein sequence | MRENDDFRRM LRSSLVAGIS GVLICAGSPT LAQAATASSD EGQARASDGS QLGDIVVTAQ
RRSRAETAQR VPIAITAVSG RQLEEMHALT LTDVGRVAPN VSLTPSGTFP GTANFLIRGI
GVNTSDPSAE PAVGVFVDGM YYGVNLGVVT DAFDLESVEI LRGPQGTLFG RNVTGGAVVM
RSRRPSGEFG LQGKVSYGNF NQISGAASVE GPLIKDVLNA KVAIMSNSNN GLFANAANPG
NRIGRHNDLI VRPIMEFKPS DRLTLTLIGE IGRMDDYGTP SINVFNNAGA PIPSGKFILS
SDFDAHSQQR WKHVILEGAY EVPNGTIKAT LTARKIRTSF ETDVDASSAQ IFSFVAPTGL
HQHQKSAEII YNGKFGDYFE LTAGGNYFQQ MANYSEARSL NGGASRPVSD GILHQKTGGV
FAQGDAHFGT VTITAGGRYT IDHKAVMTAA LGGCSLDGTV CNYAFSNAHT WRDFTPKAGI
RWQPTNALQF YFTYTKGFRG GGYGLRNSPG VLPGPYNPEK VDAYEVGAKS EWFDRRLRVN
MALYRNTYDD LQRLVQDFNL VQRTLNAASA RIQGAEIEIA AIPVRNLTLS GSVGYTDAKY
LAFNNLDLTG DKVPDPLLAK RLLLSQAPKW NYNLTASYDV PIGDAGKLNF RGNYYHLGKR
ANDDLNKAIL PSYGLLDASV SWSSADDRYK ISVFGKNLAN KLAYANGGTV SSTFESLPLL
PPRRYGVEVS FKL
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