| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4136 |
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| Symbol | |
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| ID | 5199685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4541636 |
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| End bp | 4543399 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640583690 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001264614 |
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| Protein GI | 148557032 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.679053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGCTGG CTGTCGCATC TGAACGGGCC GGCCCGCGCC GCCGGCCTCA GCGAGAGGGA
TTTGCTGCGC GACGCCATTC CGCGCTGCTT TGGAAAGATC GGGTGACCGG CGAAAGGGAA
GCGATGCAGA TCATCGACAG TCCGATGACG GGACTCATGC AGGATCATCC GTTGCAGGTC
AGCGCGCTGC TTCGCTACGC CGAGGCCGCC CATCCCGGGC GCGAGATCGT CTCGCGCCAG
GTGGACGGAT CGATCTTCCG CTATGACAAT CGCGGGCTCG CCCGGCGGGT GGCCCAGGCC
GCGAACATGC TGCGATCGCT CGGCATCGTC CCCGGCGACG TGGTGAGCTC GCTGGCCTGG
AACACGCACC GCCACCTCGA GCTGTTCTAC GCCGTGCCCG GCATCGGCGC CGTGCTGCAC
ACCGCGAACC CCCGGCTGAG CGACGACCAT GTCGCCTATA CGATCGACCA TGCCGGCAGC
CACGTCCTGC TGATCGACGA GAGTTTCGTC GATCTCGCGG TGCGGCTGCT GCCGCGCCTG
GGCAAGATCG AGACGGTCAT CCTGCTCGGC GACCGCGCCG GCGACGCCAT CGGTGCCCTG
AGCTATGAGG CGTTGCTGCG CGATCGGCCG GACATCGTCG AATGGCCATG GCTGACGGAG
CGGTCCGGCG CCTTCCTGTG CTACACGTCG GGAACGACGG GCGATCCCAA GGGCGTGCTC
TACAGCCATC GCTCGATCGT GTTGCATGCC TATGCCGCCG GGCTGTCGGG CGCGCTGGGC
TTCTCGGCGT TTGATTGCGT GATGCCGTGC CAGTCGATGT ACCATGCCAC CGCATGGGGC
CTGCCCTTCG CCGCCGCGAT CAACGGCTGC AAGATCGTCC TGCCGTGCGA CCGGATGGAC
GGCGCCAGCC TCCAGGAACT GATCCAGGCC GAAGGCGTGA CCTTTTCGGG CGGCGTACCG
ACGATCTGGA CGATGTATCT CGATCATCTG CGGCGATCGG GGCAGGGCGT CGGATCGCTG
GAGCGGATCG TGATCGGCGG GTCGGCCGTA CCGCGGGCGA TGGCAACGAC TTTCCAGAGC
CATGGCGTCG AGGTGCGCCA GCTCTGGGGC ATGACCGAGA CCAGCCCGGT GGGCGTGATC
GCCTCCCCCA CGCCGGCGAT CGAGACCCAT GGCGCCGACG CCCGCGACGA GATCGTCTGG
ACGCGGCAGG GGCGGCTCCA GTTCGGCATC GAGCTGCGCA TCGTCGACGA GGAAGGGCGC
GCGCTCCCGC ATGACGGCCG GAGCGCCGGG GCTCTGCATG TCCGTGGTCC CTGGACGGTC
GAGCGCTATT TCCGCAGCGA GGCGAGCGCG CTCGACGACG ACGGTTGGTT CGACACGGGC
GACATCGCGA CGATCGATGC CGACGGCTTC ATGCGGATCA CCGACCGCAG CAAGGACGTG
ATCAAGTCCG GCGGCGAATG GGTCAGCTCG ATCGACCTGG AGAATGCCGC GATGGCCTGC
GCCGGCGTGA AGATCGCCGC CGTCATCGGG GCGTTCCATC CCAAATGGGA AGAACGGCCC
GTGCTGATCG TGGAGGCCCA TGCCGGGGAC AGGGTCACCG AGGAAGCGAT CCGCGAGCAT
CTGGCCCGAG CCGTCGTCAA ATGGTGGATG CCCGACCGGA TCATATTCGA CACGGTGCCC
CTCACGGCGA CCGGAAAAAT CGCAAAGAGG GAGTTGCGCG AGCGCTATGC CAATTGCTTG
TCTTCTGGAC ATCGCTCAGC CTGA
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| Protein sequence | MRLAVASERA GPRRRPQREG FAARRHSALL WKDRVTGERE AMQIIDSPMT GLMQDHPLQV
SALLRYAEAA HPGREIVSRQ VDGSIFRYDN RGLARRVAQA ANMLRSLGIV PGDVVSSLAW
NTHRHLELFY AVPGIGAVLH TANPRLSDDH VAYTIDHAGS HVLLIDESFV DLAVRLLPRL
GKIETVILLG DRAGDAIGAL SYEALLRDRP DIVEWPWLTE RSGAFLCYTS GTTGDPKGVL
YSHRSIVLHA YAAGLSGALG FSAFDCVMPC QSMYHATAWG LPFAAAINGC KIVLPCDRMD
GASLQELIQA EGVTFSGGVP TIWTMYLDHL RRSGQGVGSL ERIVIGGSAV PRAMATTFQS
HGVEVRQLWG MTETSPVGVI ASPTPAIETH GADARDEIVW TRQGRLQFGI ELRIVDEEGR
ALPHDGRSAG ALHVRGPWTV ERYFRSEASA LDDDGWFDTG DIATIDADGF MRITDRSKDV
IKSGGEWVSS IDLENAAMAC AGVKIAAVIG AFHPKWEERP VLIVEAHAGD RVTEEAIREH
LARAVVKWWM PDRIIFDTVP LTATGKIAKR ELRERYANCL SSGHRSA
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