Gene Swit_4133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4133 
Symbol 
ID5196492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4539644 
End bp4540357 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content72% 
IMG OID640583688 
Productdienelactone hydrolase 
Protein accessionYP_001264612 
Protein GI148557030 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.850524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAT TGTTCGACTA TCGTGATGGG GACGTGCCGT GCCGGGGCCG GATCGCGCTG 
CCGGAGGGGC GGGGCAGGTG CCCGGCGATC GCCGTCTTCG CCGACCTGGG CGGCGTGGGG
GAGCAGACGA TCGGGCGCGC CGAGCGCCTG GCGTCGGAGT TCGGCTATAT CGGCCTCGCC
GCCGACCTCT ACGGCGAGGG GCGGTCGGTC CAGTCGATCG ACGAAGGCGT GCCGCTGGTG
CAGTCGTGGC TGGCGGAACC GGACCGGATC GTCCGCCGCG CCGGCGCCGC GCTCGATGCG
CTGGCGCGTC ATCCGCGCTG CGACGGCCGG CTGGCGGCGA TCGGCTTCTG CTTCGGCGGC
GCCGTGGTCC TCGAACTCGC GCGCGCCAAT CATCCCGACT ACCGGGCCGG GGTCAGCTTC
CACGGCAATC TGGCGACGGC CCGTCCGGGC CGGGCGGCGA TCGAGGCCTC GCTGCTGGTC
TGCCACGGCG CCGAGGACCC GTTCGTCGGC CAGGCCGAGC TGAAGGCCTT CCTCGACGAG
ATGGCGGCCT GCCGGGCCGA CTGCCAGACG ATCGCCTATA CGGGGGCCGC GCACAGCTTC
ACCAATCCCG CGATCGACGC CGTGGGGTTG GCCGGCGCCT TCTATCACGG ACGCACGGAC
GAGCGGTCCT GGCGAGCGAT GGGCCTGCAC CTTCGCGAAG CCTTCGGCAA TTGA
 
Protein sequence
MTELFDYRDG DVPCRGRIAL PEGRGRCPAI AVFADLGGVG EQTIGRAERL ASEFGYIGLA 
ADLYGEGRSV QSIDEGVPLV QSWLAEPDRI VRRAGAALDA LARHPRCDGR LAAIGFCFGG
AVVLELARAN HPDYRAGVSF HGNLATARPG RAAIEASLLV CHGAEDPFVG QAELKAFLDE
MAACRADCQT IAYTGAAHSF TNPAIDAVGL AGAFYHGRTD ERSWRAMGLH LREAFGN