| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4129 |
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| Symbol | |
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| ID | 5196503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4533191 |
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| End bp | 4535494 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640583684 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001264608 |
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| Protein GI | 148557026 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.108935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAACA GGCAAGATCA CATCGGCATA TCGGGCTTGG CGCTCATGGC CGCGCTCGTC
TGTCCGGGGG CGGCCCATGC GGCCGAGGGC GGCGCGGGCG ACGCCGCGGA GATCGTCGTG
ACCGCGCAGA AGCGCGAGCA GCGCGTCAAC GAGGTCCCGA TGTCGATCAG CGCGCTGAGC
GGCAAGGAGC TGGCCGACAA GGGCATCGTC AAGCCGGGCG ACCTGGAAAA GAGCGTGCCG
GGCTTCAGCT ACACCGTCAG CGGCTATCAG ACGCCGGTCT ACATCCTGCG CGGCGTCGGC
TATTTCGAAT CCTCGCTCGC GGCCGATCCG GCCGTGTCGG TCTATGTCGA CGAGGTCAGC
CTTCCCTATT CGGCGATGAC GATCGGCGCC GGGCTCGACC TCGAGCGTGT CGAGGTCCTC
AAGGGGCCGC AGGGCATCCT GTTCGGACGC AATTCGACCG GCGGCGCGAT CAACTATGTC
GCGGCCAGGC CCACGGCGGA GTTCGGCGCG GGGATGCGGG CGAGCTACCG CCGCTTCGGC
GAGGTGGAGC TGGAGGGCCA TGTCACGGGA CCGATCAGCG ACACGCTCCG GGTCCGCGTC
GCCGCCCGCA CCGATCAGGG CGGGGACTGG CAGCGCAGCT ATACCCGGCG CGACAGCCTG
GGCGCCAAGG ACCTGCTGGT CGGCCGCGCG ATCGTCGAGT GGGCGCCGTC CGCGGCCTTC
ACGGCGCAGC TCAACGTCAA CGGCTGGCGC GACCGGTCGG ACAACCAGGC GCCGCAGCTG
GTCGCGCTGA TCCCCAAGAC GCCGGCCAAC ATTCCCGACG TCCCCGGCAC CTTCCTCTAT
CCGCTCGCGC CCGCGAACGA TCGCGCGGCG GACTGGAACG CCGGGCGCAG CCTCAGGAAC
GACAACTCGC TCTGGCAGAC CTCGCTGCGG CTGGGCTACG ACCTGTCGTC CGACATTTCG
CTCACCTCGA TCACCAGCTA TGCCGACTAT TCGCGCTATG CGCCGATCGA CCAGGACGGC
TCGACGCTCA ACATCATCGA CAGCCTCGAC GTCGGCGGCA TCAAGTCCTT CTTCCAGGAG
CTGCGCCTGT CGGGAAAGAC CGACGCGCTG ACCTGGGTGT TCGGCGGCAA TTACGAGCGC
GACCGCATCT CCGAGCGGCT GACCTCCTTC CTCGGCGATT CGACCGGCGG GAAGATCGCG
GGCGTCCGCT ACAACGGCGC GCAGGCGAAC AACGTCCAGA TCGCCAGGAC CTACGCGCTG
TTCGGCAACG CCGAATATGA GATCATGCCC GGCCTCAGCA TCCAGGGCGG CGCCCGCTAC
ACCAAGGCGG ACCGGAGCTT CGACGGCTGC AGCGGCGACG TCGGCGACGG CCGGTTCGCG
GCGGCGTTCG TCGCGCTGCA GACCGCGCTG AAAGGCGGCA GGTCGCCCGT CGTCCCGATC
GCGCCTGGCG AATGCACCAG CCTCGACGCC AATCTCGATC CGGCGCGGCT TGTGACCAAT
TTCAACCAGG ACAATATCTC CTGGCGCGCG GGCCTGAGCT GGAAGGGGGA GGGCGGCCTG
CTCCTCTACG CCAATGTCAG CCAGGGCTAC AAAGCCGGCG GCTTCCCCAC GACCACGGCC
GCGACGCTGA CCCAGTTCAC CCCGGTGTCG CAGGAAAAGG TCGTCGCCTA TGAGGCGGGC
TTCAAGGTGC CGTTGTGGGA TCGCAAGATC CAGTGGAACG GCGCGATCTT CCGCATGGAC
TATACCGACA AGCAGGTGCG CGGGATCATC CCCGATCCGG TCCTGCGGAC CGTGCAGGCG
CTCGTCAACG TGCCGAAGTC GAAGATCGAG GGGGCTGAGG GCCAGGTGCA CATCCGCCCG
ACGCGCGGGC TCGATCTCGA TTTCTCGGGC ACCTATCTGC ACACGCGGGT CGACGACTTC
ATCGGTCTCG ACGTGTTCGG CCTCCAGCGC AATTTCGACG GCTCTCGCCT GCCATATACG
CCGAAATGGC AAGCGGTGGC GGACGCGCGC TACGCATGGC CGGTCGGCGA CCGCCTGTCG
GCCTTCGTCG GCGGGCACCT GACCTATCAC AGCGGCACCA ACGCCCAGCT CGGCGGCGTG
CCGGTGGTAG CCATCCGCGC CTATACGCTG GTCGATCTCA ACGCCGGCAT CGAGAGCGCC
GACGGCCGCT GGAAGGCGAT GTTGTTCGGC GAGAACGTGA CCAACAAATA TTATTGGAAC
TCCGCCAACA GCATCAGCGA CGTGGTGGTC CGTTATGCGG GCATGCCGGC GCGCTACGGC
GTCAGCTTCA GCTTCCAATA TTGA
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| Protein sequence | MRNRQDHIGI SGLALMAALV CPGAAHAAEG GAGDAAEIVV TAQKREQRVN EVPMSISALS
GKELADKGIV KPGDLEKSVP GFSYTVSGYQ TPVYILRGVG YFESSLAADP AVSVYVDEVS
LPYSAMTIGA GLDLERVEVL KGPQGILFGR NSTGGAINYV AARPTAEFGA GMRASYRRFG
EVELEGHVTG PISDTLRVRV AARTDQGGDW QRSYTRRDSL GAKDLLVGRA IVEWAPSAAF
TAQLNVNGWR DRSDNQAPQL VALIPKTPAN IPDVPGTFLY PLAPANDRAA DWNAGRSLRN
DNSLWQTSLR LGYDLSSDIS LTSITSYADY SRYAPIDQDG STLNIIDSLD VGGIKSFFQE
LRLSGKTDAL TWVFGGNYER DRISERLTSF LGDSTGGKIA GVRYNGAQAN NVQIARTYAL
FGNAEYEIMP GLSIQGGARY TKADRSFDGC SGDVGDGRFA AAFVALQTAL KGGRSPVVPI
APGECTSLDA NLDPARLVTN FNQDNISWRA GLSWKGEGGL LLYANVSQGY KAGGFPTTTA
ATLTQFTPVS QEKVVAYEAG FKVPLWDRKI QWNGAIFRMD YTDKQVRGII PDPVLRTVQA
LVNVPKSKIE GAEGQVHIRP TRGLDLDFSG TYLHTRVDDF IGLDVFGLQR NFDGSRLPYT
PKWQAVADAR YAWPVGDRLS AFVGGHLTYH SGTNAQLGGV PVVAIRAYTL VDLNAGIESA
DGRWKAMLFG ENVTNKYYWN SANSISDVVV RYAGMPARYG VSFSFQY
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