| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4125 |
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| Symbol | |
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| ID | 5196499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4528314 |
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| End bp | 4530569 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640583680 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001264604 |
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| Protein GI | 148557022 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000875615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAAG GAAAGATACT GCTCTGGGCG TTGGCGAGCA CCGCCTTCAC GGCTCCCGCG
TCGGCGCAGG ATGGCGATGC CGGGCGCGCC GCGGACGAGA TCGTCGTCAC CGCGCGCCAG
CGCGCCGAGG CCCTTCAGGA CGTGCCGGTC GCGGTCTCGG CGATATCGGG CGTCGCCCTG
GAGAAGGCCG GGGTGACGCA GACCCGCGAA TTGTTCGCCT CGACGCCCGG GCTGTATTTC
AGCCAGACCG GGCAGCGCCA GAATGACGAG CAATTCTATC TCACCATCCG CGGCGTCGGC
AGCTCGCCGG TCGTCGAGCC CTCGGTCGGC GTGTTCGTCG ACGGCGTCTA TATGCCGAGC
CTGGGATGGA CGGCCGATTT CCTCGACCTC GAACGGGTCG AGATTCTTCG CGGCCCGCAG
GGCGCGCTGT TCGGCCGGAA CACGGAAGGC GGCGCGGTCA GCATCGTCAC GCGCAAGCCG
TCGGCGGAGC TGCGCGGGCG CGTTTCCGCC GAGGTCGCGG AGTTCGGCAG CTGGCGGGGC
AGCGCCTCGG TTTCGGGGCC GCTCGCGGAG AATCTCTATG CCGGCATCAG CGGCTTCGCG
TCGACGACCA ACGGATATAT GCGCAACGTC ACGCGCAACG AGCATCAGGA CAACCGGGAT
CGTCACGGCG GCCGCCTGAT GCTGCGCGCG GTCGACGTCG GCGGCTTTGA GGTGCTTCTC
TCGGGCGACT ATATGAAGTC GAAGGGGCGG TTCGACGCGT TCGGCGACGC GGTGGCCGGC
CAGGCGATCA CCGTGGTCGA TCCGCAGGCC CCCGCCGCGG CGCGCGGCAC GACGCTGGTG
AGCAATCCCC TGGCGGGCCG GCGCTACACC ACCTACGGCA ATGACGAGAA CCGCGTCTCC
TCCGAGAATT ACGGCGCGGC GCTGCAGATC ATGCGCGACA TCGGCCCGGC GGTGCTGACC
TCGATCACCG GCTATCGGCG CGTACGCTCC CGCGACATAT ATGACAACGA CGCCATCGCT
ACCGCCTCCT CGGTCAACGG CGCGCTGACG AAGCAGCGCA TCCTTTCGCA GGAGTTGCGC
CTCGTCTCCG ACACGCAGGG GCCGCTGTCG TGGATCGCCG GGGCCTATGG CTTCAAGGAG
CGGCTCGATC AGGATCGTCT CTCGCAATTC TTCAGCGGGA CGACCGCCGG GCCGATCGCC
GGCAGCGGCA ACGGCTTCGG CTATGTCAGC GACGAGGCGA CGATCCGGCG CGACGGCCTC
GCGATCTTCG GCGAGGTGAA CTACGACGTC ACCGAACAGC TCGAACTCTC GCTCGGCGCG
CGCTATTCCT ACGAGAAGGT CAGGCAGGAC CCCAACCTCA ACGTCGCCGT CCAGATCGGG
GCGGTGGTGG TCAACGTCGC GAACGCCACG CCGCGGCGCA AGGCGTTCGA CGGCTTCTCG
CCTTCGGCGT CGCTGTCCTA CAAGCTGCAG CCCGGCATCC TCGTCTATGC GTCGGCCGCG
ACCGGCTTCA AGGGCGGCGG CTTCACCAAG GAGGTGCCGA ACACGCCGCT CCAGAACGCG
GCGCTCGATA ACGAGACGTC GCTCAACTAC GAACTGGGCC TGAAGGCGGA CCTGCTCGAT
CGCGCCGTCC GGCTGAACAT GGCGCTCTTC TACACCAAGC TGAAGGACCA GCAGCTCGCG
ACCCGGATAG AATTGTCCCC GGGGACGGGC GTCTACATCC CGTCCACCCT CAACGTCGGC
CGGGGCCATT CGCAGGGGGT CGAGGTCGAG ACGGTCATCC GGCCCGTCCG CCCGCTCCGC
ATCGCCGGCA ACCTGTCCTA CACCGACACG CGCTTCGACG ACTATGTCGC ATCGCCCGCG
ACCGCCACGG CGCCGGCCTA TGACAGGGCG GGGCAGGCCT TCCCCGAAGT GCCGAAATGG
CTGGCCTCGG CGAGCGTCGA ATATGCGTTC GAGCTGGGCA ACGACCTGAC GCTCGTCCCC
AATGTCAGCT GGCGGCACGT CGGCAGCAAA TATGTGGGGC AGGGCAATGC CTCGATCCCC
TTCATCACGA TCGACTCCTA CGACCTGTTC GACGCGCAGC TTTCCTTGTC CAAGGGGCCC
TGGTCGGTCG TCGCCTTCGT GAAGAACATC GGCGACAAAT ATTATCTGGC AAACCGCTTC
CAGAACCAGC CGGCGACATC GGCGCCCGGA TTCCTGAACT GGGGCAAGCC GGGGGCGCCG
CGCCAGTTCG GTGCGAGGTT CTCCTATGAC TTCTGA
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| Protein sequence | MTKGKILLWA LASTAFTAPA SAQDGDAGRA ADEIVVTARQ RAEALQDVPV AVSAISGVAL
EKAGVTQTRE LFASTPGLYF SQTGQRQNDE QFYLTIRGVG SSPVVEPSVG VFVDGVYMPS
LGWTADFLDL ERVEILRGPQ GALFGRNTEG GAVSIVTRKP SAELRGRVSA EVAEFGSWRG
SASVSGPLAE NLYAGISGFA STTNGYMRNV TRNEHQDNRD RHGGRLMLRA VDVGGFEVLL
SGDYMKSKGR FDAFGDAVAG QAITVVDPQA PAAARGTTLV SNPLAGRRYT TYGNDENRVS
SENYGAALQI MRDIGPAVLT SITGYRRVRS RDIYDNDAIA TASSVNGALT KQRILSQELR
LVSDTQGPLS WIAGAYGFKE RLDQDRLSQF FSGTTAGPIA GSGNGFGYVS DEATIRRDGL
AIFGEVNYDV TEQLELSLGA RYSYEKVRQD PNLNVAVQIG AVVVNVANAT PRRKAFDGFS
PSASLSYKLQ PGILVYASAA TGFKGGGFTK EVPNTPLQNA ALDNETSLNY ELGLKADLLD
RAVRLNMALF YTKLKDQQLA TRIELSPGTG VYIPSTLNVG RGHSQGVEVE TVIRPVRPLR
IAGNLSYTDT RFDDYVASPA TATAPAYDRA GQAFPEVPKW LASASVEYAF ELGNDLTLVP
NVSWRHVGSK YVGQGNASIP FITIDSYDLF DAQLSLSKGP WSVVAFVKNI GDKYYLANRF
QNQPATSAPG FLNWGKPGAP RQFGARFSYD F
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