| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4102 |
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| Symbol | |
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| ID | 5196463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4506708 |
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| End bp | 4507586 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640583658 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001264583 |
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| Protein GI | 148557001 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGGCC GGGACTTCGC CCTGTTCGAA CGCGCGCGGC CCCGGCTGCT CGGGCTGGCC
TATCGCATCC TCGGCTCGCG GGTCGACGCC GAGGATGCGG TCCAGGACTG CTTCCTCAAG
TGGAGCGCCG CCGACCGCGA CGCGATCGAC AATCCCGACG GCTGGCTGAC GACGATCTGT
ACGCGCCGCT GCCTCGATCT GCTGCGCGCC GCGCACCGAT CGCGCGTCGA CTATGTCGGC
GCCTGGCTGC CCGAGCCGAT CCATATGCGC GTCGACCCCG AGGAGGCGCC GGCGGAGCTC
GCCTCCTCGC TCGGCGCCGC CTTCCTGCTG ATGCTCGAGC GGCTGACCCC GAAGGAGCGC
GCCGCCTATC TGCTGCACGA GATCTTCGAC CGGCCCTATG ACGAGATCGC GGCGACGCTG
GAGATGGAGG AGCCGGCCTG CCGCAAGCTG GTCTCCCGCG CCAAGGCGAA TATCGACCAG
GGCAAGGTGC GCCACCGGAC CCCGGTCGAG ACGCAGCAGC GGCTGCTCGA CGCCTTCCGC
CAGGCGGTGA CGAGCGACCG GCCCGACCAG CTCGGCGCGC TGCTCGCCAC CGACATCCGC
GTCACCGCCG ACGGCGGCGG CAAGGTCCGC GCCTTCCTCG ACGTGCTCGA AGGCCAGCGC
CTCGCGCTCG CCTTCATCCA CCAGGCGAGC CGGTGGTGGG CGGGCTATGA ATGGGAGGAG
ATCGACATCA ACGGCGGACG CGGGCTGATC CTGCGCGACC AGGGCCAGGT GGTGGCGACC
GTCTCGTTCG GCTACGACGC CGACGACCGC ATCGCCGACA TCTTCATCAC CCGCAATCCC
GACAAGCTCG GCCGGCTCGA CCCCGCGCTG ATTCAGTAA
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| Protein sequence | MDGRDFALFE RARPRLLGLA YRILGSRVDA EDAVQDCFLK WSAADRDAID NPDGWLTTIC
TRRCLDLLRA AHRSRVDYVG AWLPEPIHMR VDPEEAPAEL ASSLGAAFLL MLERLTPKER
AAYLLHEIFD RPYDEIAATL EMEEPACRKL VSRAKANIDQ GKVRHRTPVE TQQRLLDAFR
QAVTSDRPDQ LGALLATDIR VTADGGGKVR AFLDVLEGQR LALAFIHQAS RWWAGYEWEE
IDINGGRGLI LRDQGQVVAT VSFGYDADDR IADIFITRNP DKLGRLDPAL IQ
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