| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4101 |
|---|
| Symbol | |
|---|
| ID | 5196462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 4506274 |
|---|
| End bp | 4506705 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640583657 |
|---|
| Product | alkylhydroperoxidase |
|---|
| Protein accession | YP_001264582 |
|---|
| Protein GI | 148557000 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2128] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCA CGTCCGCCCC CCGCTACGAG CAGGAGACGC CCGACATCAT CAAGGCCTTC
ACCGACGCGC AGGCGGCGGT GGGCGGCCAT GGGCTGGAGC CGCTGCTCCG CCACCTCGTC
ATGCTGCGCG CGTCGCAGAT CAACCGCTGC GGCTTCTGCG TGCAGATGCA CACGCGCGAG
GCGCGCGCCG ACGGCGAGAG CGACGAGCGG CTGGATCGCG TGATCGTCTG GGATCAGGTA
AGGGACTTCA GCGAGCGCGA GAAGGCGGCG CTCGCCTGGA CGGAGGCGCT GACCGTGCTC
GACCATCACA GCGATCTCGG CGCGTTGCGC GCCCGGTTGC GCGAGCATTT CTCCGAGGAG
GAGATCGCCG CGCTGTCGGG GCTGATCGCG ATGATCAACC TGTGGAACCG CATCGGCATT
TCGAGGCACT GA
|
|---|
| Protein sequence | MNATSAPRYE QETPDIIKAF TDAQAAVGGH GLEPLLRHLV MLRASQINRC GFCVQMHTRE
ARADGESDER LDRVIVWDQV RDFSEREKAA LAWTEALTVL DHHSDLGALR ARLREHFSEE
EIAALSGLIA MINLWNRIGI SRH
|
|---|
| |