Gene Swit_4096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4096 
Symbol 
ID5197729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4500434 
End bp4500985 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content65% 
IMG OID640583652 
Producthemerythrin HHE cation binding domain-containing protein 
Protein accessionYP_001264577 
Protein GI148556995 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.100934 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGAGG AAAAGACCAC GCGGAGCTTC GCGATCGGCG CCGCCGCCGG CCTGACCGCC 
GGGCTCGCCG CGAACGCGGT GCGCAAGATC TTCGTCCAGG CGCCGACGAT GATGGCCGGC
GAGTGGGACG ACGCGCTGGC GGCCGAGCAT CGCGCCGTGC TCGAACTGTT CGACCAGATC
CAGGCGACCG AGGAAGGGCA TGCCACGCGC CGCTCGCTGC TCCTCACCCA GATCGGCCAT
GCGCTCGCCA AGCATGCGAT GGAGGAGGAG AATGCGGTCT ACGCGACGCT GCGCATTCAT
GGCCAGGTGG CGGACGCCGA CCGGCTCAAC GGCGACCATG GCTATGTGAA GCAATATCTG
TTCGAGCTGG GCCAGATGGC GCCGGAGCAC CCGCTGTTCC TTTCCAAGAT CGGCGATTTC
CGGTCGATGC TCGAGGAGCA TATGCGCAGC GAGGAGGAGA CGGTCTTTCC CAAGCTGCGC
GGCGTGCTGA CCGAGGAGGA GAATGAGCGG CTGACCAAGA TGATGAACCT GGAGGGATTG
AAGATAGCGT AG
 
Protein sequence
MLEEKTTRSF AIGAAAGLTA GLAANAVRKI FVQAPTMMAG EWDDALAAEH RAVLELFDQI 
QATEEGHATR RSLLLTQIGH ALAKHAMEEE NAVYATLRIH GQVADADRLN GDHGYVKQYL
FELGQMAPEH PLFLSKIGDF RSMLEEHMRS EEETVFPKLR GVLTEEENER LTKMMNLEGL
KIA