| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4089 |
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| Symbol | |
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| ID | 5198926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4492795 |
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| End bp | 4493475 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640583645 |
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| Product | orotidine-5'-phosphate decarboxylase |
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| Protein accession | YP_001264570 |
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| Protein GI | 148556988 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.691507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCGCA GCCCCATCTA TGTGGCGATC GACACGCCCG ACATCGCCCG CGCCAGGGAG
ATCGCCGCGC GCGTCCGCAA CCATGTCGGC GGGATCAAGC TGGGGCTCGA ATTCTTCTCG
GCGCATGGCC AGGCCGGGGT GCGGGAGATG GCGGCGCTCG ACCTGCCCGT CTTCCTCGAC
CTCAAGCTCC ACGACATCCC CAACACCGTC GCCAAGGCGG TGCAGGCGCT CGCGAGCCTG
AAGCCCGCGA TCCTGACCGT CCACGCGGCC GGCGGGCTGG CGATGATGGA GGACGCCAAG
GCGGCGGCCC CGGCCGGCAC CAAGGTCGTC GCGGTGACCG TGCTCACCAG CCTCGACGGC
AACGACCTCG ATTCGATCGG CGTCGCCCCC GACACCCATG CCCAGGTCGA GCGGCTCACC
CTGCTCGCCA GGCAGGCCGG GCTCGACGGC GTGGTCTGCT CGGGCAACGA GGTGAAGGCC
GCCCGCAAAT TGTGGCCGCA GGGCTTCTTC GTCGTCCCCG GCATCCGTCC GGCCGACGGC
AACGGCCATG CCGACCAGAA GCGCGTCATG ACGCCGCGCC AGGCGCTCGA CCAGGGCGCC
TCGATCCTCG TCATCGGCCG CCCGATCACC CAGGCCGAGG ACCCCGACCA CGCCGCCCGC
GCGATCGAGG CGACGCTCTG A
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| Protein sequence | MTRSPIYVAI DTPDIARARE IAARVRNHVG GIKLGLEFFS AHGQAGVREM AALDLPVFLD
LKLHDIPNTV AKAVQALASL KPAILTVHAA GGLAMMEDAK AAAPAGTKVV AVTVLTSLDG
NDLDSIGVAP DTHAQVERLT LLARQAGLDG VVCSGNEVKA ARKLWPQGFF VVPGIRPADG
NGHADQKRVM TPRQALDQGA SILVIGRPIT QAEDPDHAAR AIEATL
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