Gene Swit_4084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4084 
Symbol 
ID5200307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4484194 
End bp4485339 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content69% 
IMG OID640583640 
Producthypothetical protein 
Protein accessionYP_001264565 
Protein GI148556983 
COG category[S] Function unknown 
COG ID[COG3535] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.3135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCATCA TTCGAGAGCT GCAGGAAGTC CGGGACATGG CGCGCGGCGC CGTGCTGCTG 
GGAACGGGCG GCGGCGGCGA CCCCTATATC GGCGAGCTGT TCGTGGGCGA GCAGATCAAG
CGGGGCAATT TCCCGAAGGT CATCGGGGCC GACGAGCTGG AGGACGACGC CTTCGTGCTG
TCGATCGCCG GCGTCGGCGC GCCGACCGTC GGCAGCGAGA ACCTGATCAG CGAGAAGATG
CTGATGCGCC TGCTCGCCTA TGCCGAGGCG CATTTCGGCC GGCGGGTCGA CGCGCTGATC
AGCGCCGAGA TCGGCGGCTC GAACTCGATC ATGCCGCTGG CGCTGTCGGC GATCAGCGGC
GTCCCCGTGC TCGACGCCGA CGGCATCGGG CGGGCGATGC CGCAGATCGA GATGACGACG
TTCAGCATCT ATGGCTGCCC GGCCAGCCCC TGCATCCTGA CCGACGCGCT GGGCAATGTC
GTGACGGTCG ACGCGATCAG CGACCGCAAG GTGGAGGACA TCTGCCGGGC CGTCGCCAGC
GCGCTGGGCG CGCACGTCAC CAGCGCGATC TATCCGATGA CCGGCAAGCA GGCGCGCGAG
GTGGCGGTGC AACGGTCGCT GAGCCTCGCC TACGGGATCG GCCGGTGCAT CCGCACCGCG
CGCGAGAGCT CGTCGAACAT CTTCGACGCG CTGCTCGCCT ATCTGAACGA CTGGGATGGC
CGCCACGCGC GGATATTGTT CGACGGCAAG ATCACCGACG TGATCCACGA GACGCGCGAC
GGCTGGCATT GGGGACAGGC GACGCTGAGC GGCCTGGGCG ACAATCGCGA CGAGTGCGTC
ATCGAGATCC GCAACGAGTT CCTGATCGCC CGGGTGAACG GCGAGCCGGT GGCGATGGTC
CCCGACCTGA TCACCGTGCT CGACCGCGAG ACGGGGGAGC CGCTGACCGG CAGCATGCTC
GCCTATGGCC AGCGCGTGAA GGTGCTCGGC TATGCGGCCG ATCCGATGCT CTGCCGGCCC
GAGGCGCTCG AGGTCGTCGG GCCGCGCATG TTCGGCATCG ACCTCGATTT CGTGCCGCTC
GCACAGAGCG CCGCCGCCGC GTCGCGCGTC GGCGCCAAGG CGACGGCTTC CGACCCGGTG
GCCTGA
 
Protein sequence
MFIIRELQEV RDMARGAVLL GTGGGGDPYI GELFVGEQIK RGNFPKVIGA DELEDDAFVL 
SIAGVGAPTV GSENLISEKM LMRLLAYAEA HFGRRVDALI SAEIGGSNSI MPLALSAISG
VPVLDADGIG RAMPQIEMTT FSIYGCPASP CILTDALGNV VTVDAISDRK VEDICRAVAS
ALGAHVTSAI YPMTGKQARE VAVQRSLSLA YGIGRCIRTA RESSSNIFDA LLAYLNDWDG
RHARILFDGK ITDVIHETRD GWHWGQATLS GLGDNRDECV IEIRNEFLIA RVNGEPVAMV
PDLITVLDRE TGEPLTGSML AYGQRVKVLG YAADPMLCRP EALEVVGPRM FGIDLDFVPL
AQSAAAASRV GAKATASDPV A