| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4080 |
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| Symbol | |
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| ID | 5198937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4477530 |
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| End bp | 4478384 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640583636 |
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| Product | transporter DMT superfamily protein |
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| Protein accession | YP_001264561 |
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| Protein GI | 148556979 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.44689 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCTCG GCGCCTACAC GATCTGGGGC CTGCTGCCGC TGTTCATCCG CGCGTTGCAG
GCGATGCCGG TGGCGGACAT CCTCGCGCAC CGGGTGATCT GGTCGCTCGC GGTCCTGCTC
GTCCTCGCCA CCGCGATGAA GCGCTGGACG GCGATCCGGA CGGCCATCGC CACGCCGCGC
TTCCTGCTGG CCCTGATCGC CTCGACGCTG CTGATCGGCA GCAACTGGAT GATCTACGTC
TACAGCATCA ACAGCGGCCA GACGCTGCAG GCGAGCCTCG GCTATTTCAT CAACCCGCTG
GTCAACGTGC TGCTCGGCGT CGTCTTCCTG CGCGAGCGGC TGGGCCGGCC GGAGACGCTC
GCGATCCTGC TCGCCGCGGC CGGCGTCGCC GCGCTCGCGA TCCACCAGGG CGGCGTCCCG
CTGATCCCGC TCGGCCTCGC GGCCACCTTC GGCCTCTACG GCCTCGTCCG CAAGATCGTC
GGCCTCGGCC CGGTCGAGGG CCTGCTGATC GAGACCGGGC TGCTGCTGCC GATCGCCCTC
GCCTGGCTGC TGACCATGCC GAACGTGCTC GCCCGGCCCG ACGCCCCGGC GCTCTGGCTG
GTGCTGGCGA GCGGCCTCGT CACCACCGTG CCGATGCTGC TGTTCGTCGG CGCGGCCCAC
CGGATGCGCT ATTCGGAGCT CGGCCTGCTC CAATATATCG GCCCGACCCT GCAACTGCTG
ATCGCGGTGG CGGTGTTCGG CGAGCCGCTG CGGCCGATCC ACATGCTCGC CTTCGCGCTG
ATCTGGGCGG GGCTCGCGGT CTATGTCGCC GTCACCTGGC ACCGGGGGCG GGTGACGCCG
ACCTTGCCCG AATAG
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| Protein sequence | MGLGAYTIWG LLPLFIRALQ AMPVADILAH RVIWSLAVLL VLATAMKRWT AIRTAIATPR
FLLALIASTL LIGSNWMIYV YSINSGQTLQ ASLGYFINPL VNVLLGVVFL RERLGRPETL
AILLAAAGVA ALAIHQGGVP LIPLGLAATF GLYGLVRKIV GLGPVEGLLI ETGLLLPIAL
AWLLTMPNVL ARPDAPALWL VLASGLVTTV PMLLFVGAAH RMRYSELGLL QYIGPTLQLL
IAVAVFGEPL RPIHMLAFAL IWAGLAVYVA VTWHRGRVTP TLPE
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