Gene Swit_4067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4067 
Symbol 
ID5198678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4468365 
End bp4468742 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content66% 
IMG OID640583623 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_001264548 
Protein GI148556966 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.563451 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCAAT TGTCGCTTGG TCAGGCGGCC GATGACGAGG CCGAACGTCG GCGGCTGGGC 
GACCGCTTGC GCGAAGCCCG CAAATATCTC GGCCTGAAGC AGGACGAGGT TGCGACCTAT
CTCAAGATAC CCCGCACCGC ATTGACCGAC ATCGAAAGTG GTCAACGCCG GGTCGAAGCG
ATCGAACTCA CGCGCCTTGC CAAGCTCTAC CGGCAGTCAG TCGCCTATTT CACTGGCGAG
GACGAGGCGT CGGCGAGCCT GCCGGTCGAT GTCGCCCATC TCGCGCGGCG CGTCGCCGAT
CTGTCGACCG AGGACCGCGC CGAACTCAGC CGCTTCGCCG AGTATCTTCT CGCGCGATCG
TCGGGCGGGG CGGCCTGA
 
Protein sequence
MTQLSLGQAA DDEAERRRLG DRLREARKYL GLKQDEVATY LKIPRTALTD IESGQRRVEA 
IELTRLAKLY RQSVAYFTGE DEASASLPVD VAHLARRVAD LSTEDRAELS RFAEYLLARS
SGGAA