Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4067 |
Symbol | |
ID | 5198678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 4468365 |
End bp | 4468742 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640583623 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001264548 |
Protein GI | 148556966 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.563451 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGCAAT TGTCGCTTGG TCAGGCGGCC GATGACGAGG CCGAACGTCG GCGGCTGGGC GACCGCTTGC GCGAAGCCCG CAAATATCTC GGCCTGAAGC AGGACGAGGT TGCGACCTAT CTCAAGATAC CCCGCACCGC ATTGACCGAC ATCGAAAGTG GTCAACGCCG GGTCGAAGCG ATCGAACTCA CGCGCCTTGC CAAGCTCTAC CGGCAGTCAG TCGCCTATTT CACTGGCGAG GACGAGGCGT CGGCGAGCCT GCCGGTCGAT GTCGCCCATC TCGCGCGGCG CGTCGCCGAT CTGTCGACCG AGGACCGCGC CGAACTCAGC CGCTTCGCCG AGTATCTTCT CGCGCGATCG TCGGGCGGGG CGGCCTGA
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Protein sequence | MTQLSLGQAA DDEAERRRLG DRLREARKYL GLKQDEVATY LKIPRTALTD IESGQRRVEA IELTRLAKLY RQSVAYFTGE DEASASLPVD VAHLARRVAD LSTEDRAELS RFAEYLLARS SGGAA
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