| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4065 |
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| Symbol | |
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| ID | 5198676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4466671 |
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| End bp | 4467345 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640583621 |
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| Product | peptidase C1A, papain |
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| Protein accession | YP_001264546 |
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| Protein GI | 148556964 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4870] Cysteine protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.561338 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCGA TCAAGACAGA TCTTCGGCAC CTGCTCGGAC CGGTGCGCGA TCAGGGCGCG
CGGCCGACCT GTCTCGCCTT CGCTGCGAGC GATGGACACG CCGCCTTGCG CGACGGATTG
ATTCCGCTTT CCTGCGAATA TGCCTATTTT CACGCCCAGC GCCGTGGCCG TCGCGCTCCC
GATCAGGGCG CGACCCTGTC CACGATGCTT GATGCGCTAC GGCTGGACGG GCAGCCTGCC
GAAAGCGGGT GGCCCTATCT CGACATCGTT CCGGACAGTG AATGGGCTCC GCCATCGGTG
ACCGGACCAT GCTTTGGCCG CAAGGGCGGC ACGGCCACGC TTGATCTCGC CGAGATCCTT
GCTTCGCTCG ATGCCGAGCG GCCGGTCATG TTGCTGTCCA GCCTCTCCGC CTCGTTCTTC
CAGCCGTCGG GCGAAGGGAT CGTCGATCCG GCGAATGACG AGATGCCCGA TCCCAGCCTT
CGCCATGCGA CCCTCGCGGT CGGCCATGGC CTCGCCGACG GACAGAGCGC GATCCTCGTG
CGAAACAGCT GGGGAGCCGG CTGGGGTGTC GAGGGCCATG CCTGGCTCAC CGAGAAATTC
CTGAAGCCGC GCCTGTTCGC GACGGCGATC CTGACGGAGG AGATCGATGT ACCTTCCCGT
TCCGCCGCAG CCTGA
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| Protein sequence | MIAIKTDLRH LLGPVRDQGA RPTCLAFAAS DGHAALRDGL IPLSCEYAYF HAQRRGRRAP
DQGATLSTML DALRLDGQPA ESGWPYLDIV PDSEWAPPSV TGPCFGRKGG TATLDLAEIL
ASLDAERPVM LLSSLSASFF QPSGEGIVDP ANDEMPDPSL RHATLAVGHG LADGQSAILV
RNSWGAGWGV EGHAWLTEKF LKPRLFATAI LTEEIDVPSR SAAA
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