| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4052 |
|---|
| Symbol | |
|---|
| ID | 5196409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 4455138 |
|---|
| End bp | 4455689 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640583609 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001264534 |
|---|
| Protein GI | 148556952 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5328] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACCC CCCAAGGATC TGCATGCTTC ACTTTGCCAA GCGGCTCCGC CAAGGCTAAG
GCCGAGACAA TGTCCGATCC GCGCATCATC GCCATCGATC TCGACGAGAA GACGATCATC
TGGCGCAATG CCGATGTCGA GCAGGAGCGG CGCGTCGCCA TCTTCGACCT GCTCGAGGGC
AATCATTTCA AGCCCTTGCG CGCCTATCCC CAGGACTATG CCGGCCCCTA TCGGGTCAAG
CTCAGGGTCG AGGAGGGGCG GCTGGCGATC GACGTCCACG CCGACTCCAG CGACCTGCTC
GAAACACTGG TCCTCGGGCT CGCCAGCTTC CGCCGGCCGA TCAAGGATTA TTTCGCGATC
TGCGACAGCT ATTTCCAGGC GATCCGGACC TCGACCGCGC AGCAGATCGA GACGGTCGAC
ATGGCCCGGC GCGGCATCCA CAACGATGCG GCGCAGCTCC TCAAGGAGCG GCTGGAAGGC
AAGATCGAGG TCGACTTCGA CACCGCCCGC CGGCTCTTCA CGCTGATCTG CGTGCTGCAC
ATCCGTGGCT GA
|
|---|
| Protein sequence | MQTPQGSACF TLPSGSAKAK AETMSDPRII AIDLDEKTII WRNADVEQER RVAIFDLLEG
NHFKPLRAYP QDYAGPYRVK LRVEEGRLAI DVHADSSDLL ETLVLGLASF RRPIKDYFAI
CDSYFQAIRT STAQQIETVD MARRGIHNDA AQLLKERLEG KIEVDFDTAR RLFTLICVLH
IRG
|
|---|
| |