| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4045 |
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| Symbol | |
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| ID | 5198978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4449033 |
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| End bp | 4449566 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640583602 |
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| Product | peptide deformylase |
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| Protein accession | YP_001264527 |
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| Protein GI | 148556945 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.606485 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCC GTCTGATCCT CGAAGCGCCC GATCCGCGGC TGCGCACCAT CTCCACGCCG
GTGGAGGCGG TCGACGACGA ACTGCGCGCG CTGATCGCCG ACATGTTCGA AACCATGTAC
GACGCGCCCG GCATCGGCCT GGCGGCGATC CAGGTCGGCG TGCCGAAGCG CGTGCTGGTG
ATCGACCTGC AGGAGGAAGA GGACGCCGAG GGCAAGCCGA TCCGCCATCC GCGCGTCTTC
ATCAATCCCG AGCTGTTCGA TCCGTCGGAG GAGCAGTCGG TCTACAATGA AGGCTGCCTG
TCGGTCCCCG AGCAATATGC CGAGGTCGAG CGTCCGGCGG TGATCCACGC CCGCTGGCTC
GACGAGCAGG GCGCGAAGCA TGAGGAGCGG CTCGAAGGCC TGCTCGCCAC CTGCCTCCAG
CATGAGATGG ACCATCTCGA AGGCATCCTC TTCATCGACC ATCTGTCGCG CCTGAAGCGC
GAGATGGTGA TGAAGAAGCT CGAAAAGGCC CGCCGCGCCC GCAAGGCGGC CTGA
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| Protein sequence | MAIRLILEAP DPRLRTISTP VEAVDDELRA LIADMFETMY DAPGIGLAAI QVGVPKRVLV
IDLQEEEDAE GKPIRHPRVF INPELFDPSE EQSVYNEGCL SVPEQYAEVE RPAVIHARWL
DEQGAKHEER LEGLLATCLQ HEMDHLEGIL FIDHLSRLKR EMVMKKLEKA RRARKAA
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