Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4041 |
Symbol | truA |
ID | 5199945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 4446148 |
End bp | 4446912 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640583598 |
Product | tRNA pseudouridine synthase A |
Protein accession | YP_001264523 |
Protein GI | 148556941 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.31208 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.408277 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGCT TCCGCCTGAC CGTCGAGTTC GACGGGCGCC CCTTCATGGG CTGGCAGCGG CAGGCGCACG GCCCCAGCGT CCAGCAGGCG ATCGAGGAGG CGATCACCGC CGTCACCGGC GAGCGGGCGG TGATCCACGC CGCCGGGCGG ACCGATGCCA GGGTCCATGG CCGGGCGATG ACCGCGCATG CCGACATCGC CAAGCCGATC ACGCCGTTCC GGCTGAAGGA GGCGCTCAAC GCGCGGCTGC GCCCCGCGCC GGTCGCGATC CTCGCCTGCG AGCCGGTCGC CGGCGACTGG CATGCCCGCT TCTCCTGCGT CGGCCGGCGC TACGTCTACC GCATCGTCAA CCGCCGCGCG CCGCTGACCT TCGACGCCGG CCTCGCCTGG CAGGTCGCGG CCGACCTCGA CGACCAGGCG ATGCACGCGG CGGCGCAGTG CCTCGTCGGG CGGCACGACT TCACCACCTT CCGTTCGGCG CATTGCCAGG CGGAAAGCCC GGTCAAGACG CTCGACCGGC TCGACGTGCG CCGTTCGGGC GAACTGATCG AGATCGAGGC GGCGGCGCGC TCCTTCCTCC ATCACCAGGT CCGCTCGATG GTCGGCTGCC TCGCGCTGGT CGGCCGGGGC CGCTGGACCG CCGCCGACCT GGCCGACGCG CTGGCGGCGG CGGACCGCGC CCGGCTCGGC CTCAACGCGC CGCCCGACGG GCTCTATTTC ATGGAAGCCG TCTATCCGGC GGAAACGGGG GAAACCGCCC GATGA
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Protein sequence | MTRFRLTVEF DGRPFMGWQR QAHGPSVQQA IEEAITAVTG ERAVIHAAGR TDARVHGRAM TAHADIAKPI TPFRLKEALN ARLRPAPVAI LACEPVAGDW HARFSCVGRR YVYRIVNRRA PLTFDAGLAW QVAADLDDQA MHAAAQCLVG RHDFTTFRSA HCQAESPVKT LDRLDVRRSG ELIEIEAAAR SFLHHQVRSM VGCLALVGRG RWTAADLADA LAAADRARLG LNAPPDGLYF MEAVYPAETG ETAR
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