| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4039 |
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| Symbol | |
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| ID | 5199943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4443828 |
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| End bp | 4445729 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640583596 |
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| Product | asparagine synthase (glutamine-hydrolyzing) |
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| Protein accession | YP_001264521 |
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| Protein GI | 148556939 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
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| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing)
[TIGR03108] exosortase 1 system-associated amidotransferase 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.354675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.528504 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGGGA TCGCCGGCCT CTATCATCTG CAGACCGCCA AGCCGGTCGA GGACGCCCGC
GTCCGGGCGA TGACCGACAT GATCGCGCAT CGCGGGCCCG ACGGATCGGG GGTGTGGACC
GGTCCGGGCG TCGGTCTCGG CCATCGCCGG CTGTCGATCA TCGATCTCGC GGGCGGCGCC
CAGCCGATGG CCAGCGCCGA CGGCCAGGCG ATGCTCAGCT ATAATGGCGA GGTCTATAAT
TACCGGGCGG TGCGCGCCGA GCTGGAAGCG CTCGGCCGCG CCTTCCGCAC CAGCAGCGAC
AGCGAGGTGA TCGTCGAGGC GTGGCGCCAA TGGGGGCCCG ACTGCCTGTC GCGGCTCAAC
GGCATGTTCG CCTTCGCGAT CCACGACCGC GAGCGCGGCT GCCTGTTCCT GGCGCGCGAC
CGGCTCGGCG TGAAGCCGCT CTTCTATGCC GAGCTGTCCG ACGGCAGCGT CGCCTTCGGG
TCGGAGCTCA AGGCGCTGCT CGCCCATCCG CTGCTGCGTC GCAGTCCCGA TTTCAGCGCG
GTCGACGACT ATCTGGGGCT CGGCTACGTC CCCGACGACA CCAGCATCGT CGCGGGCGTG
AACAAGCTGC CCGCCGGCCA TTACCTACTG CTCCGGCGCG GCGCGCCGCT GCCCCGGCCG
GTGCAATGGT GGGACGTCAG CTTCGCCGAC CGTGCGAAGG GCAGCCGCGC CGCGCTGGAG
GAGGAACTGG TCGGCATCAT GCGCGCCGCC GTCACCGACC GGATGGTGTC GGACGTGCCG
CTCGGCGCCT TCCTGTCGGG CGGGGTCGAC AGCTCGGCGG TGGTCGCTCT GATGGCGGAG
GCGAGCCGGC AGGCGGTCAA GACCTGCTCG ATCGGCTTCG ACCATCCCGA TTTCGACGAG
ACCCGCTACG CCGCCGCGAT CGCGGAGCGC TTCGCCACCG ATCATCGCAC CCGCATCGTC
TCGGCCGACG ACCATGGCCT GGTCGACACG CTGGTCGCGG CGTTCGACGA GCCCTTCGCC
GACGCCTCCG CGCTGCCGAC CTACCGCGTC GCCGAACTGG CGCGCGAGAC GGTGACGGTC
GCGCTGTCGG GCGACGGCGC GGACGAGGCC TTCGCCGGCT ATCGGCGGCT CACTTTCTTC
CAGGCCGAGG AGCGGGTGCG CGGGCTGCTC CCGCTCGGCT TCCGGCGCGG CCTGTTCGGG
ACGCTCGGCC GGGTCTATCC CAAGCTCGAC CGGGCGCCGC AGATGCTGCG CGCCAAGAGC
ACGCTGGAGG GGCTCGGCCG GTCGAGCGAG GAGGCCTATG CGCTCGCGGT CGGCGTCACC
GGGCCGGCGC TGCGGCGGCG GCTCTACACC GATCGCGCGG TCCGCGAGTT GCAGGGCCAT
CGCGCCGAGG ATCGCTATAT CGCCGCGATG CGGGCGGCCC CGGCGCGCGA CGCGCTCGAC
CGCGCCCAAT ATGCCGACCT CAAGATCTGG CTGCCCGGCG ACATCCTGAC CAAGGTCGAC
CGCACCAGCA TGGCGGTCGG CCTGGAGGCG CGCGAGCCGC TGCTCGACTA TCGGCTGGTC
GAGTTCGCGG CGCGGCTGCC GGTGCGGATG CGGGTGCGCG GCACGACCGG CAAATGGCTG
CTCAAGCAGG CGATGCGCCG CTATCTGCCC GACGACATAT TGTTCCGCCG CAAGATGGGC
TTCGTCACCC CGATCAGCGC CTGGTTCCGG GGCCCGCTGG CCGAGGAGGC GCGGCGGATC
GCCAGGGCCT CCTCGCTGGT CGAGACCAGC TGGTTCGACC CCGCCGCGCT CGACGCCGTC
GTCGCCGAGC ACCAGGCCGG CCGCTTCGAC CATGGCCGCC TGCTGTGGCA GCTGATGATG
CTCGACCGCT CGCTGGGGCG GCTGTTCGGG GCGGGGCGAT AA
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| Protein sequence | MCGIAGLYHL QTAKPVEDAR VRAMTDMIAH RGPDGSGVWT GPGVGLGHRR LSIIDLAGGA
QPMASADGQA MLSYNGEVYN YRAVRAELEA LGRAFRTSSD SEVIVEAWRQ WGPDCLSRLN
GMFAFAIHDR ERGCLFLARD RLGVKPLFYA ELSDGSVAFG SELKALLAHP LLRRSPDFSA
VDDYLGLGYV PDDTSIVAGV NKLPAGHYLL LRRGAPLPRP VQWWDVSFAD RAKGSRAALE
EELVGIMRAA VTDRMVSDVP LGAFLSGGVD SSAVVALMAE ASRQAVKTCS IGFDHPDFDE
TRYAAAIAER FATDHRTRIV SADDHGLVDT LVAAFDEPFA DASALPTYRV AELARETVTV
ALSGDGADEA FAGYRRLTFF QAEERVRGLL PLGFRRGLFG TLGRVYPKLD RAPQMLRAKS
TLEGLGRSSE EAYALAVGVT GPALRRRLYT DRAVRELQGH RAEDRYIAAM RAAPARDALD
RAQYADLKIW LPGDILTKVD RTSMAVGLEA REPLLDYRLV EFAARLPVRM RVRGTTGKWL
LKQAMRRYLP DDILFRRKMG FVTPISAWFR GPLAEEARRI ARASSLVETS WFDPAALDAV
VAEHQAGRFD HGRLLWQLMM LDRSLGRLFG AGR
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