| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4035 |
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| Symbol | |
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| ID | 5198832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4439130 |
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| End bp | 4440728 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640583592 |
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| Product | AAA ATPase |
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| Protein accession | YP_001264517 |
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| Protein GI | 148556935 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | [TIGR03015] putative secretion ATPase, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.267259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.70324 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGACCATG ATCCCTACGG CCTGACCGAC CGGCCGTTCC AGCTCACGCC CGATCCGCGC
TTCTATTTCG AGAGCGCGAC CCACCGCAAG GCAATGACCT ATCTGGGCTA CGGACTGGCC
CAGGGCGAGG GGTTCATCGT CGTCACCGGC GAGGTCGGCA CCGGCAAGAC CATGCTGGTC
GGCCGCCTGA TGGCGACGAT CGACCGATCG CGGCTGACCG CGATCAACCT CGTCTCGACC
CAGCTCGAGG GCGAGGACAT CCTGCGGATC GTCGCGCTCG CGCTCGGCGT CGCCACCGAC
GTCGCCGCCA AGGGGCAGCT GCTCGCCCGG ATCGAGCGCT TCCTCCACGA ACAGGCGCGC
AGCGGCAAGC GCACCCTGCT GATCGTCGAC GAGGCGCAGA ACCTGCCCAT CTCGGCGCTC
GAAGAGCTGC GCATGCTGTC CAACTTCCAA TATGGCGGAC AGGCGCTCCT CCAGATATTC
CTGCTCGGCC AGCCCGAGTT CCGCGAGGCG CTGGCCCAGC CGCGCTTCGA ACAGCTCCGC
CAGCGCGTGA TCGCCACCCA TCACCTGACC GCGATGGGCG CGGACGAGGT CGCCCCCTAT
ATCATGCACC GGCTGGCCTG CGCCGGCTGG AAGGGGACGC CGCGCTTCAC CCAGGATGCC
TATGAGGCGT TCCACCGGCT GTCGGGCGGC ATCCCGCGCC GGCTGAACAT GCTCGCCGGC
CGGGTGATGC TGCAGGGCGC GATCGAGCGG CTGACCGACA TCGACGGCGA GGTGGTCGAG
GACGTCGCCG CCGACCTGGC GAGCGAGAGC ATCATGCCCG CCGCCGGCCC GCAGCCGCAG
GCGCGGGCGA TGCCGCCGGC GCCCGAGCCG CAAAGCTACG CCTATCGCCC GCCGGCCGCG
CCCGAGCCGG TCATGGAACC CGCGCCGCAA TGGACGCCCG CGCCGATGCC CGCCGCCGCT
CCGCCGGCCG AGGCCTATGC GGCGCCGACC CGCGCGCCGG GCCTGCCTTC CTATACGAGC
TACGCTCCCG ACGAGGCGGA CGGGCCGCCG GCGCCCGCGG CCCAGCCGGA CCCGTTCGTC
GGGCTGGCCA GCCACATCCC GCCGCCCGCG ATCGAGCAGC CGCCCCGCTA TGACGGCTAT
GTCCCGCCCG AGGCGGTCGT GCCGTCGCCC TCGCCGATCG CGGCGCCGCG TCCGCCGATG
TGGAGCGTGG AAGCGGAGCC TGCACCGGCG CCAACGCCTG CGCCCGTTGA TACGCCCGCG
CCCATCTGGG CTCCGGCGCC CCAGCCGATC GCCGCGCCGC CGCCGGAAGC TTTCGCGCCT
CCGGTCCAGC CCGCCTATCG GCCGCCCGTC GCGGAGCCGT CGGCCGCGCC CCAGCAGCCC
GCCTATCAGC CGCCCGCTTA TCAGCCGCCC GTTCCTGCGG CCGATCCGGC GGTGGCGGAC
TATGCCGCGC GCAATGCCGA GCTCGAAGCG CGGCTGGCCG AGCAGGAGGC GATGCTGCGG
CGAACGCTGT CGCTGCTGGT CGAACTGGTC GAGACCGACC CGCAATTGCC GAAGGACCCG
CAAGGCAGCG GCAATGGCGG CAACCAGGAC GCGGCCTGA
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| Protein sequence | MDHDPYGLTD RPFQLTPDPR FYFESATHRK AMTYLGYGLA QGEGFIVVTG EVGTGKTMLV
GRLMATIDRS RLTAINLVST QLEGEDILRI VALALGVATD VAAKGQLLAR IERFLHEQAR
SGKRTLLIVD EAQNLPISAL EELRMLSNFQ YGGQALLQIF LLGQPEFREA LAQPRFEQLR
QRVIATHHLT AMGADEVAPY IMHRLACAGW KGTPRFTQDA YEAFHRLSGG IPRRLNMLAG
RVMLQGAIER LTDIDGEVVE DVAADLASES IMPAAGPQPQ ARAMPPAPEP QSYAYRPPAA
PEPVMEPAPQ WTPAPMPAAA PPAEAYAAPT RAPGLPSYTS YAPDEADGPP APAAQPDPFV
GLASHIPPPA IEQPPRYDGY VPPEAVVPSP SPIAAPRPPM WSVEAEPAPA PTPAPVDTPA
PIWAPAPQPI AAPPPEAFAP PVQPAYRPPV AEPSAAPQQP AYQPPAYQPP VPAADPAVAD
YAARNAELEA RLAEQEAMLR RTLSLLVELV ETDPQLPKDP QGSGNGGNQD AA
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