| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4032 |
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| Symbol | |
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| ID | 5198829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4434835 |
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| End bp | 4436358 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640583589 |
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| Product | PEP-CTERM locus polysaccharide chain length determinant |
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| Protein accession | YP_001264514 |
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| Protein GI | 148556932 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR03007] polysaccharide chain length determinant protein, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.077437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.946432 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCCA TCTACACCGA GATCAGGATT GCCCTGTACG CGATCTGGCG GATGCGCTGG
CTGGCGCTCG CCGTCGCCTG GGCCTTCTGC CTGGTCGGCT GGGTGATGGT GATGCGGGTC
CCCGCCGCCT ATGAGAGCAG CGCGCGCATC CAGGTCCAGG TCAAGTCGCT GTTCGCCGAC
GGGGCCGAGA ACGACATGCA GCGCAATGTC GATCGCGTCC GCCAGTCGCT GACCTCGACC
GAGATATTGA AGCGGGTCGT CCGCACCGTC TCCAACGGCG AGCGGCCGCT GACCTCCTAC
GAGTCCCTGT CGCTGATCGG CGCGCTGCGC TCGGGCATCT CCATCACCGC GCAGGGCGAC
GACCTGCTCG AGATCAAGAC GCGGATCAGC CTGAAGGGCA TTTCCGAGCA GCAGACCGCC
GCGATCGCCC GCAACGTCAC CCAGAAGCTG ATCGAGATAT TCATCCAGGA GAATGTGATC
GGCAGCAAGG CGAACAACGC CGAGACGCTG AGCTTCCTCG ACCAGGAACT GGCCCGCCGC
GCCAAGGAGC TGGCCGAGGT CGACCGCCAG CGCGCGCAGA TCACCCAGAA CACGCTCGGC
TCGCTGCCGG GCACGGGCTC GCTCGACCAG CGGATGGACG CCGCGCGCAA CGAGATGGTC
AATCTCGATT CGAACCTGAT GCAGGCGCGC AGCGCGCTGG CGGCGATGAA CGGCCAGCTC
GCCGCCACCC CGGCGCAGAT ACCGGCGGGC AGCGTCAACG GCATCGACAC GCTCGACCAG
CGCATCGGGA CGCTCGAAGG GCAGCTTTCG GAAGCGATCT CGCGCGGCTG GACCGAGAAG
CATCCCGACG TCATCGCGAT CCGTTCCCAG CTCAAGCAGC TCCGCGCCGA AAAGGCGCGC
GGCGGCAGCC GGTCGGTGCC GATGGCGCCC AACCCCGTCT ATGTTTCGCT CAAGTCGATG
CAGGCCGAGC GCGAGGGCAA TGTCGCGGCG CTCCAGGCGC GCAAGTCGCA GCTCGAACAG
GCGGTGACGA CGATCGCGCA GCGCCAGCTC ACCGCGCCCG GTGCCCAGAT CGACCAGGCC
CGGCTCGACC GCGACTATGA CGTGCTCAAG GACCAGTACA ACAAGCTGCT CGCCCAGCGC
GAGTCCGCGA AGCTGCGGTC CGACGCGACC GGCAAGACCG ACGGCGTCCA GTTCCGGGTG
ATCGACCAGC CGTCGCTGCC GCGCCAGCCG GCGGCGCCCA ACCGGGCGAT GCTGCTCACC
GGCGTGCTGG TCGCCGGCAT CGTGATCGGC GCGGGCGTGG CCTTCGCCAA GAGCCAGCTC
GCCAATGTCT ACACGACCAC CCAGCAGCTC GCGAAGGCCA GCGGCCTGCC GGTGCTCGGG
TCGATCTCGG AGGTGATCAC CGCCGACACG CGGGTGATCC GGCGCAAGCA GATGATGTGG
TTCTCCTCGG CCGCCGCGGG GCTGCCGGGG ATGTTCATGC TGCTGATGCT GATCGAGTTC
GTCAAACGCA TCATGGTGTC CTGA
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| Protein sequence | MEAIYTEIRI ALYAIWRMRW LALAVAWAFC LVGWVMVMRV PAAYESSARI QVQVKSLFAD
GAENDMQRNV DRVRQSLTST EILKRVVRTV SNGERPLTSY ESLSLIGALR SGISITAQGD
DLLEIKTRIS LKGISEQQTA AIARNVTQKL IEIFIQENVI GSKANNAETL SFLDQELARR
AKELAEVDRQ RAQITQNTLG SLPGTGSLDQ RMDAARNEMV NLDSNLMQAR SALAAMNGQL
AATPAQIPAG SVNGIDTLDQ RIGTLEGQLS EAISRGWTEK HPDVIAIRSQ LKQLRAEKAR
GGSRSVPMAP NPVYVSLKSM QAEREGNVAA LQARKSQLEQ AVTTIAQRQL TAPGAQIDQA
RLDRDYDVLK DQYNKLLAQR ESAKLRSDAT GKTDGVQFRV IDQPSLPRQP AAPNRAMLLT
GVLVAGIVIG AGVAFAKSQL ANVYTTTQQL AKASGLPVLG SISEVITADT RVIRRKQMMW
FSSAAAGLPG MFMLLMLIEF VKRIMVS
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