Gene Swit_4022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4022 
Symbol 
ID5198635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4424078 
End bp4424578 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content71% 
IMG OID640583580 
Productcyclic nucleotide-binding protein 
Protein accessionYP_001264505 
Protein GI148556923 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAATG CCCGATATAT CGCCGCCGGC CTGAGCGATG CCGACATGCT GTGGCTGCTG 
TCCGTGGGCA AGCTGCGGGT GCTGCGCCCC GGCGAGACGC TGGTCGCGTC GGGCAAGCCG
GTCGCCGACC TGTTCTTCGT CACCGACGGC CGGCTCGAGG TCCGGCTCGA CGACGGGACC
CGCGTCGCCG AGCTGCACCA TGGCGACGTG GTCGGCGAGA TGTCGTTCGT CGAGCGCCAC
TCGCCGCTCG TGTCGGTGGT CGCGGCCGGC CCCAAGCCGA CCGAGATGCT CGCCATCCCG
CGCAAGCTGA TCCTCGACCG GTTCGAACAG GAGCCGGTGT TCGCGGCGCG CTTCTACCGC
GCGCTCGCGG TGTTCCTGTC CGAACGGCTG CGCGAGACCA CCGCCGCCGT CCGCGCCCAG
GCGAAGAGCC TCCGCGACGA CAAGGCCGAC AAGGAAGCGC GGGCGCGCTT CAGCCGGCTG
TTCAGCAAGT CGGGGCCGTG A
 
Protein sequence
MQNARYIAAG LSDADMLWLL SVGKLRVLRP GETLVASGKP VADLFFVTDG RLEVRLDDGT 
RVAELHHGDV VGEMSFVERH SPLVSVVAAG PKPTEMLAIP RKLILDRFEQ EPVFAARFYR
ALAVFLSERL RETTAAVRAQ AKSLRDDKAD KEARARFSRL FSKSGP