| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3985 |
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| Symbol | |
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| ID | 5197634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4375198 |
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| End bp | 4375611 |
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| Gene Length | 414 bp |
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| Protein Length | 137 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640583541 |
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| Product | BadM/Rrf2 family transcriptional regulator |
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| Protein accession | YP_001264468 |
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| Protein GI | 148556886 |
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| COG category | [K] Transcription |
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| COG ID | [COG1959] Predicted transcriptional regulator |
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| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.250922 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCTGTCCC AACGAACCCG ATATGCGATC CGCGCCCTGC TCCATCTCGC GGATCATCAC
GGCGAAGGGC CGATCCAGCT CGCCGAGATC GCGGAGCGGC AGAATATTCC CGCCAAATTC
CTGACCGTCA TCCTGTCGGA GATGAAGCGC GCCGGCTTCG TCGAGACGAT GCGCGGCAAG
GAAGGCGGCT ACTGGCTGTC GCGCGCGCCG ACCGAGATCA CCTATGGCGA CATCGTCCGC
GCCACGCGGG GATCGCTGGC GCTGGTGCCG TGCGCAGCCC GGCTCGCCTA TACGCCGTGC
GATCATTGCA TCGACGAAAC CGAGTGCCGG CTGCGCGGCG TGATGCTCTC GGTCCGCGAC
GAAACGGCGA AAATTCTCGA CCAGTTGTCG CTGGCGGAAT CGATTCCGCT ATAG
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| Protein sequence | MLSQRTRYAI RALLHLADHH GEGPIQLAEI AERQNIPAKF LTVILSEMKR AGFVETMRGK
EGGYWLSRAP TEITYGDIVR ATRGSLALVP CAARLAYTPC DHCIDETECR LRGVMLSVRD
ETAKILDQLS LAESIPL
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