| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3965 |
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| Symbol | |
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| ID | 5196973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4351231 |
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| End bp | 4352223 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640583521 |
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| Product | KpsF/GutQ family protein |
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| Protein accession | YP_001264448 |
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| Protein GI | 148556866 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.355443 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATAACAC ACGACATCCG GTCCGAAGCG ACCGCGAAAC AGCTATTGGA ACGCGGCCGC
CAGGTGCTGA GGGCCGAGAT CGACGCCCTC CTCCAGCTCG AAGCCTATCT CGACGACAAT
TTCGCCGGCG CCGTGCGGAT GCTCGACGCG ACCCAGGGCC GCATCGTCGT CACCGGCATG
GGCAAGTCGG GGCATATCGC CCGCAAGATG GCCGCCACCT TCGCGGCGAC CGGCTCGCCC
GCGATCTTCA TCCACCCGGC CGAAGCGGCG CATGGCGACC TCGGCATGGT GCAGCAGGGC
GACACGCTGA TCGTCCTGTC CAATTCGGGC TCGACGCCCG AGCTGACCCC GATCATGCAG
CATTGCCGCA GCATGCGCAT CCGCATCATC GGCATCGCCT CGCGGCTCGA TTCGCCGGTG
ATGCAGGCCT CCGACGTCCG CCTGCTGCTG CCGCAGGTGC GCGAAGCCTG CCCCAGCAAC
ATCGCGCCGA CCAGCTCGAC GACGATGATG CTCGCGCTCG GCGATGCGCT CGGCATGGCG
CTGATGGACC TGCGCGGCGT CGCCCGCGAC AATATCAAGA AGCTGCATCC GGGCGGGGCG
ATCGGCCTGC GCCTGATGGC GGTGAGCGAG ATGATGCACG GCGGCGCCAG CCTGCCGCTG
GTGCGCCGCG ACACGCCGAT GCGCGAGGTG ATCATGACGA TGACGTCGAT GGGCTTCGGC
GCCGCCGGCG TGGTCGATGA CGACGGCCGC CTGGTCGGGG TGATCACCGA CGGCGACCTT
CGCCGCCATG TCGGCGACCT GGGCGACGGC GTCGCCGCCG CCGTGATGAC GCGCAATCCC
AAGACGGTGC CGCTCGGCAC CCTCGCCGAG GACGCGCTGA TGATCATGAA CGACTGCAAG
ATCACCACCG TCTTCGTGAT GGAGGACGAA CGGCCCGACA CGCCGGCCGG CATCGTCCAT
ATCCACGATT TCGTCCGCTA CGGCCTGAGC TGA
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| Protein sequence | MITHDIRSEA TAKQLLERGR QVLRAEIDAL LQLEAYLDDN FAGAVRMLDA TQGRIVVTGM
GKSGHIARKM AATFAATGSP AIFIHPAEAA HGDLGMVQQG DTLIVLSNSG STPELTPIMQ
HCRSMRIRII GIASRLDSPV MQASDVRLLL PQVREACPSN IAPTSSTTMM LALGDALGMA
LMDLRGVARD NIKKLHPGGA IGLRLMAVSE MMHGGASLPL VRRDTPMREV IMTMTSMGFG
AAGVVDDDGR LVGVITDGDL RRHVGDLGDG VAAAVMTRNP KTVPLGTLAE DALMIMNDCK
ITTVFVMEDE RPDTPAGIVH IHDFVRYGLS
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