| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3964 |
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| Symbol | |
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| ID | 5196972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4350413 |
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| End bp | 4351216 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640583520 |
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| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
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| Protein accession | YP_001264447 |
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| Protein GI | 148556865 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
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| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.543074 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACG TCGCGGTCAT CATTCCCGCG CGCTACCAGT CGTCGCGCTA TCCGGCCAAG
CCGCTGGCGC CGCTGGTCGG CGCGACCGGC ACGCCCAAGC CGCTGATCCG GCGAAGCTGG
GAATGCGCGG CCGCGATCGT CGATCCCGCC TCGATCTGGA TCGCGACCGA CGACGATCGC
ATCGCCGATG CGGTGCGCGG CTTCGGCGGG CAGGTGGTGA TGACCGCCGA GAGCTGCGCC
AACGGCACCG AGCGCTGCGC CGACGCGATC GCGCGGCTCG GCATCGCGCC CGAGATCGTC
GTCAACCTGC AGGGCGACGC CCCGCTGACG CCCGGTCATG TCGTCGCCGC GCTGGTCGAC
GCGCTGCGCG CGATGCCCGA TGTCGCGATG ACCACCCCGG CGATCCGCTG CGCGCGGAGC
ACCTATGCCC ATCTGGTCGA GGACCAGGCG CAGGGCCGGG TCGGCGGCAC CACGGTGGTG
TTCGGCGCCG ACCGCCGCGC GCTCTATTTC TCGAAGCGGG TGATCCCGCA TCTGCCGCCC
GAAGCCGCGA CGATGGCCTT CCCGCCGGTC CACCTCCACC TCGGCGTCTA TGCCTATCGG
CCCGACGCGC TGCGCCGCTA CGTCGCGATG GGCGTATCGG AACTCGAACT GCTCGAGGGG
CTTGAGCAGC TCCGCTTCCT GGCGGGCGGC ATCGCCGTCG GGGTGGTGCC GTTCGATCCG
ATCGAATGGG ACGCGATCGA GCTCAACAAC CCGACCGACG TCGCCCCGAT CGAAGCCATC
CTCAAAGCGC GCGGCATCGC CTAA
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| Protein sequence | MADVAVIIPA RYQSSRYPAK PLAPLVGATG TPKPLIRRSW ECAAAIVDPA SIWIATDDDR
IADAVRGFGG QVVMTAESCA NGTERCADAI ARLGIAPEIV VNLQGDAPLT PGHVVAALVD
ALRAMPDVAM TTPAIRCARS TYAHLVEDQA QGRVGGTTVV FGADRRALYF SKRVIPHLPP
EAATMAFPPV HLHLGVYAYR PDALRRYVAM GVSELELLEG LEQLRFLAGG IAVGVVPFDP
IEWDAIELNN PTDVAPIEAI LKARGIA
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