Gene Swit_3958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3958 
Symbol 
ID5199976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4345361 
End bp4346359 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content70% 
IMG OID640583514 
Productcysteine synthase A 
Protein accessionYP_001264441 
Protein GI148556859 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.328768 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACATG ACATGATAGC GCCCGATGCG CTCGCCCTGA TCGGCAACAC CCCCCTCGTT 
CGACTGAAGG GCCCCAGCGA AGCCACCGGC TGCGAGATCC TCGCCAAGTG CGAGTTCATG
AATCCCGGCG GTTCGGTGAA GGACCGCGCC GCGCTGGCGA TCATCACCGA TGCCGAGGAA
CGCGGCCTGA TCGCGCCGGG CGGGATCATC GTCGAGGGCA CCGCCGGCAA CACCGGCATC
GGCCTGGCGC TGGTCGGCAA TGCGCGCGGC TACCGCACGA TCATCGTCAT GACCGACACC
CAGAGCCAGG AGAAGCAGGA CACGCTGCGC GCGCTGGGCG CCGAGCTGGT GCTGGTGCCG
CCGACCGCCT ATTCGAACCC CGCCCATTAC GTCCACACCT CGCGCCGGAT CGCCGAGGAG
ACGCCGGGGG CGCTCTGGGC CAACCAGTTC GACAACACCG CCAACCGCCT CGCCCATATC
CGCACCACCG CGCCCGAGAT CTGGGCGCAG ACCGGCGGCC GGATCGACGG CTTCACCTGC
GCGGTCGGCA CCGGCGGCAC GCTGGCCGGC GTCGGCCTGG GCCTGAAGGC GTTCAGCGAG
GACGTCGTGA TCGGGCTGAC CGACCCATAC GGCGCCGCGC TCTTCAACTA TTTCGCGCAT
GGCGAGCTCA AGGCCGAGGG ATCGAGCGTC GCCGAGGGCA TCGGCCAGAG CCGCATCACC
GCCAATCTCG ACGGCGCGCC GGTCGACACC CAGTTCCGCG TCTCCGACGA GGAGGGCCTC
GAACAGGTGA TCGCCCTGCT CGGCAGCGAG GGGCTGTGCG TCGGCCTGTC GTCGGGCATC
AACGTCGCCG GCGCGATCGC GCTGGCGAAG GAGCTGGGGC CGGGCAAGAC GATCGTCACG
ATCCTGTGCG ATTCCGGGAT GCGCTACCTG TCGTCGCTGT TCAATCCGGC CTGGCTGGAG
GCCAAGGGCC TGCCGGTCCC GGCGCTGCTG CGCCGCTGA
 
Protein sequence
MAHDMIAPDA LALIGNTPLV RLKGPSEATG CEILAKCEFM NPGGSVKDRA ALAIITDAEE 
RGLIAPGGII VEGTAGNTGI GLALVGNARG YRTIIVMTDT QSQEKQDTLR ALGAELVLVP
PTAYSNPAHY VHTSRRIAEE TPGALWANQF DNTANRLAHI RTTAPEIWAQ TGGRIDGFTC
AVGTGGTLAG VGLGLKAFSE DVVIGLTDPY GAALFNYFAH GELKAEGSSV AEGIGQSRIT
ANLDGAPVDT QFRVSDEEGL EQVIALLGSE GLCVGLSSGI NVAGAIALAK ELGPGKTIVT
ILCDSGMRYL SSLFNPAWLE AKGLPVPALL RR