| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3952 |
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| Symbol | murE |
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| ID | 5197123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4339306 |
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| End bp | 4340769 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640583508 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
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| Protein accession | YP_001264435 |
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| Protein GI | 148556853 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.278869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTGA CTGACCTCCT GGCCGGGTTT CCGGCCACGA CCGGCGCGGA CGCCGGCGAC
GCGCGGATCA CCGGCTTCGC GATCGACCAT CGCAAGGTCG CGCCGGGCAC GGTGTTCGGC
GCCTTCAGGG GCAGCCGCTT CAACGGCGAG GACTTCATCG CCCAGGCCGT CGCCGACGGC
GCGGCGGCGA TCGTCTCCGC GCCCGGCGTC GCCGTGGGCA GCGCAATCGG GGGCGCGGTC
CACATCGTCG ACGACGAGCC GCGCCGGCTG TTCGCCCGGC TTGCCGCGCG CTTCTTCGCG
CCCTTCCCCG ACACCACGGT CGCCGTCACC GGCACCAACG GCAAGACCTC GACGGTCGAG
CTGACCCGCC AGCTGTGGCG GATGGCGGGC TTCCACGCCG CCTCGATCGG CACGCTCGGC
GTCACCACCG CCGACGAGCA GGTGTCGACC GGGCTGACCA CCCCCGACAT CGTCACCTTC
CTGTCGAACA TGGCGGGGCT CCGCAAGGAA GGCGTCACCC ACGCCGCCTT CGAGGCGTCG
AGCCACGGCC TGTCGCAATA TCGGACCGAG GGGCTGCCGG TGCGCGCGGC GGCCTTCACC
AATCTGAGCC GCGACCATCT CGACTATCAC GGCACGATGG AGGCCTATTT CGCGGCCAAG
CTGCGCCTGT TCACCGAGGT GGTGGACCAG GACGGCGCGG CCGTGGTCTG GGCCGACGAT
CCGCGATCGG TCGAGGTGAT CGCGGCGGTG CGGGCGCGCG GCGTCCGCCT GCTCAGCGTC
GGCGCGGCCG GGGAGACGAT CCGCCTGGTC GAGCGCACGC CGACCGCGCT CGGCCAGACG
CTCAAGCTCG AGATCGAGGG CAAGGCGCGC GAGGTGAAGC TGCCGCTGAT CGGCGCCTAC
CAGGCCGCCA ACGCGCTGGT CGCGGCCGGG CTGGTCGTCG CCACCGGCGG CGAGATCGGC
CTGACCCTCG CCAATCTCCA GCGGGTCGCG CCGGTGCGCG GCCGGCTCGA ACGCGCCGCG
ATCAGCCGAA CCGGCGCGCC GATCTATGTC GATTATGCGC ATACGCCCGA CGGGCTGGAG
GCCGCGATCG AGGCGCTGCG CCCGCACACC GAGGCCCGGC TGATCACCGT GTTCGGCGCC
GGCGGCGACC GCGACACCGG CAAGCGGCCG CTGATGGGCG AGGTATCGGC CCGGCTGTCC
GACCGCACCA TCGTCACCGA CGACAATCCG CGCAGCGAAG ACCCCGCCGC GATCCGCCGC
GACGTGATGG CCGGGGCAAC CGGCGCGATC GAGATCGGCG GCCGGCGCGA GGCGATCGCC
GCCGCCATCG CCGAAGCGCA GGCCGGCGAC ATCGTCCTGA TCGCCGGCAA GGGCCATGAA
CAGGGGCAGA TCGTCGGCGC CGGCGACCAG ATGCGCGTCC TGCCCTTCGA CGACGTCACC
GTCGCGCGGG AATGCGCGGC ATGA
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| Protein sequence | MRLTDLLAGF PATTGADAGD ARITGFAIDH RKVAPGTVFG AFRGSRFNGE DFIAQAVADG
AAAIVSAPGV AVGSAIGGAV HIVDDEPRRL FARLAARFFA PFPDTTVAVT GTNGKTSTVE
LTRQLWRMAG FHAASIGTLG VTTADEQVST GLTTPDIVTF LSNMAGLRKE GVTHAAFEAS
SHGLSQYRTE GLPVRAAAFT NLSRDHLDYH GTMEAYFAAK LRLFTEVVDQ DGAAVVWADD
PRSVEVIAAV RARGVRLLSV GAAGETIRLV ERTPTALGQT LKLEIEGKAR EVKLPLIGAY
QAANALVAAG LVVATGGEIG LTLANLQRVA PVRGRLERAA ISRTGAPIYV DYAHTPDGLE
AAIEALRPHT EARLITVFGA GGDRDTGKRP LMGEVSARLS DRTIVTDDNP RSEDPAAIRR
DVMAGATGAI EIGGRREAIA AAIAEAQAGD IVLIAGKGHE QGQIVGAGDQ MRVLPFDDVT
VARECAA
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