| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3951 |
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| Symbol | |
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| ID | 5197122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4337760 |
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| End bp | 4339178 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640583507 |
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| Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
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| Protein accession | YP_001264434 |
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| Protein GI | 148556852 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTC CCCTCTGGAC GGCCTTCGAC ATCGCCGCCG CCGTGGACGG CGAGGTCTAT
GGCGATTTCC GCACCGACGG CGTCACCTTC GACTCGCGTG AGGTCGGCCC CGGCGACCTG
TTCATCGCGC TGAAGGGCGA GACGACCGAC GGCCACCGCT TCCTCGACAA GGCGTTCGCC
GCCGGCGCGG CGGGCGCAAT CGTCTCCGAC GCCTGCGACG GACCGCACGT CCGCGTCGCC
GACACGATGG CGGCGCTCGA CGCGCTCGGC GCCGCGGCAC GCGATCGGAT GCACGGCCGG
GTGATCGGCG TCACCGGATC GGTCGGCAAG ACCGGCACCA AGGAAGCGCT CTACGCCTGC
CTCGACCGCG CCCTGCCCGG CCGGGTCCAT CGCTCGGTCA AGAGCTACAA CAACCATACC
GGCGTTCCGC TGAGCCTCGC CCGCATGCCC GCCGACACCC GGATCGGCGT GTTCGAGATG
GGGATGAACC ACAGCGGCGA GCTGGCGGCG CTGACCCGGC TGGTCCGCCC GCACGTCGCC
ATCGTCACCG CGATCGCCCC CGCGCACAGC GCCTTCTTCG CCAGCGAGGC CGACATCGCC
GACGCCAAGG GCGAGATATT CCAAGGGCTG CAGCCCGGCG GCGTCGCGAT CATCCCCTAT
GACAGCCCGC ATCGCGACCG GCTGATCGCC GCAGCGAAAC CCCATGCCGC GCGCATCCTG
ACCTTCGGCA TGGACCGCGC CGCCGACGTC CATGCGCAGG ACGTGATCCC GCTCGACCGG
GGCACGCTGC TGTCGCTGGT CCTGCCGGAT GCCGAACTGA CCTTCACCAT CGCCCCGCCG
GGCGAGCATT GGGTGTCGAA CGCGATGGCG GTGATCGCCG CCGTCTGGGC GGTGGGCGGC
GACCTCGCCG CCGCCGGCCT CGCCTTCGCC GAGATGGAGG GGCTTCCCGG CCGCGGCCAG
CGCAGCACGA TTGCGGTCGG ATCGGGCGCA GTGGGATCGG GGGAGGCGCT GCTGATCGAC
GAGAGCTACA ACGCCAACCC CGCCTCGATG GCCGCGACGA TCAAGATGCT GGGCCGCGAG
CGCGCCGACC GTCGGCTCGC CGTGCTTGGC GAGATGCGCG AGCTGGGCGC CGGATCGGCC
GGCTATCACG CCGATCTCGC CGGGCCGCTG CGCGACGCCG GGGTCGATTT CGCTCTGCTC
GTCGGATCCG AGATGGCCGC GCTCGCGAAC GCCCTTGAGG GACGCATCGA ATTCGAGCAT
GTGCCCGACG CCGACGCGGC GATCGAGTCG ATCGAAGCGA AGATCGCGCC CGGCGACGCC
ATATTGATCA AGGGATCCAA CGCGATCGGC CTGTCGCGTC TCGTCGCGCA TCTGCGCACG
AAGGCGGTGG CCGGCGAAAG GACGACATGC TCTACCTGA
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| Protein sequence | MTAPLWTAFD IAAAVDGEVY GDFRTDGVTF DSREVGPGDL FIALKGETTD GHRFLDKAFA
AGAAGAIVSD ACDGPHVRVA DTMAALDALG AAARDRMHGR VIGVTGSVGK TGTKEALYAC
LDRALPGRVH RSVKSYNNHT GVPLSLARMP ADTRIGVFEM GMNHSGELAA LTRLVRPHVA
IVTAIAPAHS AFFASEADIA DAKGEIFQGL QPGGVAIIPY DSPHRDRLIA AAKPHAARIL
TFGMDRAADV HAQDVIPLDR GTLLSLVLPD AELTFTIAPP GEHWVSNAMA VIAAVWAVGG
DLAAAGLAFA EMEGLPGRGQ RSTIAVGSGA VGSGEALLID ESYNANPASM AATIKMLGRE
RADRRLAVLG EMRELGAGSA GYHADLAGPL RDAGVDFALL VGSEMAALAN ALEGRIEFEH
VPDADAAIES IEAKIAPGDA ILIKGSNAIG LSRLVAHLRT KAVAGERTTC ST
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