| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3933 |
|---|
| Symbol | |
|---|
| ID | 5199804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 4316578 |
|---|
| End bp | 4317591 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640583489 |
|---|
| Product | Beta-N-acetylhexosaminidase |
|---|
| Protein accession | YP_001264416 |
|---|
| Protein GI | 148556834 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCCT TGTTCCTCGG CATGGCCGGG ACCGAGCTTT CCGACGCCGA GCGCAGCTTC
TTCCGCGATC TCGATCCGGC CGGCTACATC CTGTTCAAGC GCAACGTCGC CGATCGCGCC
CAGCTTCGCG CGCTGACCGA CGCGCTGCGC GCCATTGCCG GCCGCGACGA CCTGCCGATC
CTGATCGACC AGGAAGGCGG GCGGGTGGCG CGGATGCAGC CGCCCGAATG GCCGGCCTTC
CCCAAGGCCG AGCTGTTCGA CCGGCTCTAC GACATCGCGC CGATGACCGC GATCGAGGCA
GCCCGCCACA ACGCCCAGGC GATCGCGGCG ACGCTCGCCA AGGTCGGCAT CACCGTCGAC
TGCCTGCCGC TGCTCGACGT CCGCCAGCCG GGCGCGCACG ACATCATCGG CGACCGCGCG
CTGGGGGCCG AGCCGCTGCG CGTCGCGGCG ATGGGCCGCG CGGTGATCGA GGGCCTGCGC
GCCGGCGGCG TGGTCGGCGT CGTCAAGCAT GTGCCCGGAC ATGGCCGGGC GATGGCCGAC
AGCCATGTCG AGCTGCCCGT CGTCGATGCC GATGCCGCGG CGCTGGAAAC CGACCTCGCC
CCGTTCGTCG CGCTCAACGA CGCGCCGATG GCGATGACCG CGCACGTCGT CTACCCGGCG
TGGGACGCCG CCGAATGCGC CAGCCTGTCG GCCAGCGTGA TCGGCGGGAT CATCCGCGGG
CGGATCGGCT TCGACGGGCT GCTGATGTCC GACGACCTGG GCATGCACGC GCTGACCGGC
GGCTTCGGCG ACCGGGCGGC GGGCGTGCTG GCGGCGGGGT GCGACATCGC CCTGCACTGT
TCGGGCGACA TGGCCGAGAT GGAAGCGATC GCGGGCGCGG TGGGGTCGAT CGGCGACCAG
GCCCGCGCGC GGCTCGACCG CGCGATGGCG ACCGTCGCCG GCCGCCGCGA CGGCAACCCG
GCCGAGCAGC TGATCGCGAA GCGCGACGCG CTGCTGGCTA TCTTGCCGGC CTGA
|
|---|
| Protein sequence | MTPLFLGMAG TELSDAERSF FRDLDPAGYI LFKRNVADRA QLRALTDALR AIAGRDDLPI
LIDQEGGRVA RMQPPEWPAF PKAELFDRLY DIAPMTAIEA ARHNAQAIAA TLAKVGITVD
CLPLLDVRQP GAHDIIGDRA LGAEPLRVAA MGRAVIEGLR AGGVVGVVKH VPGHGRAMAD
SHVELPVVDA DAAALETDLA PFVALNDAPM AMTAHVVYPA WDAAECASLS ASVIGGIIRG
RIGFDGLLMS DDLGMHALTG GFGDRAAGVL AAGCDIALHC SGDMAEMEAI AGAVGSIGDQ
ARARLDRAMA TVAGRRDGNP AEQLIAKRDA LLAILPA
|
|---|
| |