Gene Swit_3932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3932 
Symbol 
ID5199803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4315759 
End bp4316532 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content70% 
IMG OID640583488 
Productcondensin subunit ScpA 
Protein accessionYP_001264415 
Protein GI148556833 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGACG AGGAGGACAA TTTCGACCTG CCGCTGGCGG AGGCTCGTTC CGACGAGGTG 
CTGACGCTCG ACATCGACGG CTGGGAGGGG CCGCTCGACC TGCTGCTGAG CCTCGCCCGC
GCCCAGAAGG TCGATCTCGC CAGGATATCG ATCCTCGCGC TGACCGAGCA ATATCTGTCC
TTCATCGACA ACGCCAAGGC GCTCAAGCTG GAGATCGCCG CCGACTATCT GGTGATGGCG
GCGTGGCTCG CCTATCTCAA ATCCTGCCTG CTGCTGCCCA AGGACCCCGA GGTCGAGCCG
AGCCCCGAGG AGCTGGCGCT GCGGCTGCAA CTGCGCCTGC AACGGTTGCA GGCGATGCGC
GAGGCGGGCG CGCGGCTGAT GGGACGCGAC CGGCTCGGCC GCGACGTGTT CGCGCGCGGC
ACGCCCGAGG GGCTGAAGGT CGTCCGCAAG GCGGCCTGGG ACGCCAGCCT GTTCGACCTG
ATCTCCGCCT ATGGCGCGGT CCGCGCGCGC GGCGAGGAGG CGGTCCATGT CGTCCAGCGG
CGGCCGGTGA TGACGCTCGA CCAGGCGATC GAGCGGGTGT CGATGATGGT CGGCGCGGTG
ATCGACTGGA CCAGCCTGGA GGCCTTCCTG CCCCCCGGCG CGTCGGGCGA CTATCGCCGC
TCGGCGCTCG CGTCGAGCTT CCTCGCCGCG CTCGAGCTCG CCCGGCAGGG CCGGGTCGCG
CTGCAACAGG ATGAAGCCTT CGCGCCGCTC ATGCTGCGGA GCGCGGCGGC ATGA
 
Protein sequence
MGDEEDNFDL PLAEARSDEV LTLDIDGWEG PLDLLLSLAR AQKVDLARIS ILALTEQYLS 
FIDNAKALKL EIAADYLVMA AWLAYLKSCL LLPKDPEVEP SPEELALRLQ LRLQRLQAMR
EAGARLMGRD RLGRDVFARG TPEGLKVVRK AAWDASLFDL ISAYGAVRAR GEEAVHVVQR
RPVMTLDQAI ERVSMMVGAV IDWTSLEAFL PPGASGDYRR SALASSFLAA LELARQGRVA
LQQDEAFAPL MLRSAAA