Gene Swit_3927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3927 
Symbol 
ID5200366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4313301 
End bp4313528 
Gene Length228 bp 
Protein Length75 aa 
Translation table11 
GC content63% 
IMG OID640583483 
Productentericidin EcnAB 
Protein accessionYP_001264410 
Protein GI148556828 
COG category[S] Function unknown 
COG ID[COG5510] Predicted small secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGGG AACCAAGCCC GACAGCGAGC ATTGATCCGA TGCAGCTTCC GTCGCGGAAG 
CCTCAGAGCA TCCAGGAAAG GTTTGCCATG TTCAAACGCA CCATCGCCGT CGCCTTCGTC
AGCCTTTCGC TGCTCGCGGT CACCGCGTGC AATACGGTCG AGGGCGCGGG CAAGGACGTA
TCCTCGGCCG GCCGCGCGGT CTCCGACGCC GCCGACGATT CGAAATAA
 
Protein sequence
MDREPSPTAS IDPMQLPSRK PQSIQERFAM FKRTIAVAFV SLSLLAVTAC NTVEGAGKDV 
SSAGRAVSDA ADDSK