| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3924 |
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| Symbol | |
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| ID | 5199380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4309409 |
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| End bp | 4310104 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640583480 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001264407 |
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| Protein GI | 148556825 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGGAC AGGCCCGCAC CGCGATGGCG GCGAACGCTT CAGCTGGGGT AGCAGATCAT
ATGGATGACG AGGATCGGGA CGTCGACGGC GTCGAGACGC CGCGCGGCGA GCTGGTCGCC
TTGTCCGACG ACGAGTTCAA GGACGAGCTC GCGCGGGTGA TCCCCCATCT CCGCGCCTTC
GGCCGCTCGC TGTCGGGCAA TCGCGACCTC GCCGACGATC TCGTCCAGGA GACGCTGATG
AAGGCCTGGG CGGCGCGCAA GCGCTTCCAG GCGGGCACCA ACATGCGGGC CTGGACCTTC
ATCATCCTGC GCAACCTGTT CCTGTCGCAG ATGCGGCGCG CCCGCTTCCG CGGCGAATGG
GACGAGCATA CCGCCAACAA GTTGCTGGCT GCGCCCGCTT CGCAGGACCG CCACATCGAG
CTGGCCGACA TGCAGCGCGC GCTGATGCAC CTGCCGCAGC CGCAGCGCGA GGCGCTGATC
CTCGTCGGGG CTGGCGGCTT CGCCTATGAA GAAGCCGCCG AGATCTGCGG CTGCGCGGTG
GGAACGATCA AGAGCCGGGT GGCCCGCGGG CGCGCCGCGC TCGAACAGCT CCTCGACCAT
GGCCAGTTGC CGTCGCGCCG CGAGCACAAG ACCGATCCGT CGACCACGAC GCTCCAGCAG
ATCATGGCCG ACGTCGATCA CCTCAGCAAG GAATAG
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| Protein sequence | MAGQARTAMA ANASAGVADH MDDEDRDVDG VETPRGELVA LSDDEFKDEL ARVIPHLRAF
GRSLSGNRDL ADDLVQETLM KAWAARKRFQ AGTNMRAWTF IILRNLFLSQ MRRARFRGEW
DEHTANKLLA APASQDRHIE LADMQRALMH LPQPQREALI LVGAGGFAYE EAAEICGCAV
GTIKSRVARG RAALEQLLDH GQLPSRREHK TDPSTTTLQQ IMADVDHLSK E
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