Gene Swit_3917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3917 
Symbol 
ID5196240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4300133 
End bp4300609 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content69% 
IMG OID640583473 
ProductNUDIX hydrolase 
Protein accessionYP_001264400 
Protein GI148556818 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGAAGA CGCTTCCCTA TCGCCCGGCG GCGGCGATCA TGCTGCTCAA TGCCGAGGAC 
AAGGTGTTCG TGGCGCAGCG GATCGACAGC GCGCTCGAGG CCTGGCAGAT GCCGCAGGGC
GGGCTCGACC CCGACGAGGC GCCAGAGGCC GGCGCGCTGC GCGAGCTGGA GGAGGAGACG
GGCATCGGCC CCGGCCTCGT CGAGATCCTG GCCAAGGCGC CCGACATCCT GCTCTACGAC
CTGCCGCCGG AATTGCAGGG CAAGATCTGG GGCGGCCGCT ATCGCGGGCA GGCGCAGCAC
TGGTTCGTCG CGCGCTTCCT GGGTACCGAC GCCGATGTCG ACCTCGACAC GCCCGAGCCC
GAATTCCGTG CCTGGAAATG GGTCGACGCC GGCGAGCTGG TCGACCTGAT CGTGCCGTTC
AAGCGCGAGC TCTACACGCG GGTGATCGAG GTGTTCCGCG ATCATCTGCC GCGCTGA
 
Protein sequence
MKKTLPYRPA AAIMLLNAED KVFVAQRIDS ALEAWQMPQG GLDPDEAPEA GALRELEEET 
GIGPGLVEIL AKAPDILLYD LPPELQGKIW GGRYRGQAQH WFVARFLGTD ADVDLDTPEP
EFRAWKWVDA GELVDLIVPF KRELYTRVIE VFRDHLPR