| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3915 |
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| Symbol | |
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| ID | 5200829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4298203 |
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| End bp | 4299150 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640583471 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001264398 |
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| Protein GI | 148556816 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCATG TCGTTCACCA CCCTCATTAT GTCTCGCCGG CCGCGCCGGG AAGCAGCTTC
AGCTTCGACA AATATGGGCT GGTGATGCAG GCGCTGGCCG AAAGCGGCGC CGATCCCCTT
CTCCACCAGC CCGACCCGAT GCCGCGCGCA TGGATCGAGG CGGTCCACGA TCCCGACTAT
GTGGACGAGG TCGCCGCCTG CCGGGTGCCG CCCGTCAAGG CGCGGCGAAT CGGCTTCCCG
GTCACCGAGC GGGTGGCGCG GCGCGCCTTC CTCGCCCCCG GCGGCACCTG GCTGGCGGCG
AAGCTGGCGC TGCGGCACGG CTATGCCGCC AACGGCGCGG GCGGCAGCCA CCATGCGATG
GCCGACAGCG GCGCCGGCTA TTGCGTGTTC AACGACCTCG CCATCGCCGC CAACCGGCTG
ATCGTCGAGC GCGACGCCGC GCGGATCATG ATCGTCGACC TCGACGTCCA CCAGGGCGAC
GGGACGGCGG TGCTGACCGC CGGCCGGCCC GACATCTTCA CCTTCTCGAT CCACAGCGAG
CGCAACTTCC CCGCGCGCAA GGCCCGGTCC TCGTTCGACC TGGGGCTGCC CGACGACACC
GACGACGCCG ATTATCTCGC GGCGCTGGCG GGGCACCTGC CCGCCGCGAT CGACGCCTTC
GCGCCCGACC TGATCCTCTA CCAGGCCGGG GTCGACCCGC ATCGGGAGGA CAAGCTCGGC
CGGCTCGCGC TCAGCGACGA GGGGCTGGCC GACCGCGACC GCTTCGTGAT GCGGCAGGCG
CGGCGGCGCG GCATCCCGCT GGCCAGCGTG CTCGGTGGCG GCTATGGCGA CGACCGCCTC
GCCGTGGCGC GGCGGCACGT CGGATCGATC CTCGCGCTGT ACGAGGCCTT TCACGACGCC
GGCATGCCGG GCGAGACAGG CACCGCCGCC CTATTGGATT CGCTCTGA
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| Protein sequence | MLHVVHHPHY VSPAAPGSSF SFDKYGLVMQ ALAESGADPL LHQPDPMPRA WIEAVHDPDY
VDEVAACRVP PVKARRIGFP VTERVARRAF LAPGGTWLAA KLALRHGYAA NGAGGSHHAM
ADSGAGYCVF NDLAIAANRL IVERDAARIM IVDLDVHQGD GTAVLTAGRP DIFTFSIHSE
RNFPARKARS SFDLGLPDDT DDADYLAALA GHLPAAIDAF APDLILYQAG VDPHREDKLG
RLALSDEGLA DRDRFVMRQA RRRGIPLASV LGGGYGDDRL AVARRHVGSI LALYEAFHDA
GMPGETGTAA LLDSL
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