| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3901 |
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| Symbol | |
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| ID | 5199812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4285313 |
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| End bp | 4287298 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640583457 |
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| Product | integral membrane sensor hybrid histidine kinase |
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| Protein accession | YP_001264384 |
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| Protein GI | 148556802 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0390399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACGT TCTCTCCCGA CGCCTTGAAG CGGGGTCTGT CCCCGGCGAC GCAGCGTGCG
CTCGCGGCAG CGGTCCTCGC CCTCACGGCG CTGGGGCTGC TTGTCGCCGT CGTCATGATG
GTCGCGCAAT CGAACGCCGC GCGCGACGAT GCGCTGCGGC GGGAGCAGCA CAGCTACGAC
ATCATGGTGC TGACCCGTTC GCTCGATGCG TCGCTCGCGC GCTCGGAAGC CGCGCTCGGC
CGCTATGTGG TGAACGGCGA CCGCAAGGTC GGCACCATCT ATTATGACGA ATGGCGCCGG
GCGATGAGCC AGCTCCGCCA GCTCGACAGG CTGGTCGGCG AGCAGCCCGA CCAGGTGAAG
CTGGTCCGCA AGCTCGAAGG GCTGGCGAGC CAACGCGACA AGGAACTGAC CGACGCGGCG
TCCTTCGCCA ATGTCGGCAA GGGCTGGTAC GCGATCGGCA TGTTCAACAA GGCCGGCGAA
TCCCCCAATG TCGTCGCCAT ATCCGCGACC CTCGAACAGA TCGCCGCGAA CGAGCGGACC
CGCCTTGGCG TCCGGTCCGA GGCGACCTTC TTCTCGGCCG AGCGGGCCAA CGGCTTCGCG
ACGCTGCTGT CGGTCCTCGG CCTCGTCCTG ATGGGGCTCG CCATCCTGCT CGGCTGGCTG
GTCGCGGCCG CCGCCGCGCA GCGCGCCCAT GCCGCCGAAC AGGCCGAGGC CGAGGCCGAC
CGCGCCTCGC AGCTCGAGGC CGCCGTCGCC GAACGGACGC GCGAGCTGCG CGAGGCCAAC
GACCGGCTGC GCGAGGAGAG CGAGACGCGC GTCCGCGCCG AGGCGCAGCT CGCCCAGGCG
CAGAAGATGG AGGCTGTCGG GCAGCTCACC GGCGGCATCG CGCACGACTT CAACAATATG
CTGGCCGTGG TGGTCGGCGG GCTCGACCTC GCCCGGCGCA AGATCGCCCA GCGCCCGGCC
GAGGCGGGAG TCCATCTCGA CGGCGCGATG GAAGGGGCCG ACCGCGCGGC GGCGCTCACC
CGCCGGCTGC TGTCCTTCGC CCGCGCCGAA CCCTTGCTGC CCGATGCGGT GCTGCCGGCC
AAGCTGGTCG CAGGCATGAA CGTCCTGCTC GACCGGACCC TCGGCGAACG CGTCACCGTC
CAGGTCGACA CGGCGGGCGC GCACTGGCCG ATCTGGGCCG ATGCGCACCA GCTCGAAAAT
GCGATCCTCA ACCTCGCGGT CAACGCCCGC GACGCGATGG AGGGGGCGGG GCGGCTCGAC
ATCTCGGTCG CCGACGTCGC GGTCGCCGCG GGCGATTCAG CCGACGTCAA GCCGGGCGAC
TATGTCCGGA TCAGCGTCGC CGACACCGGC TGCGGCATGT CCCCGCAGGT GCTGGCCCGC
GCCTTCGAGC CCTTCTTCAC GACCAAGCCG GTCGGCAAGG GCACCGGCCT CGGCCTCAGC
CAGATCTTCG GCTTCGTGCG GCAGTCGCAC GGCGACGTCC GCGTCGATTC GGAAGTGGGC
AAGGGCACGA CCATCTCGCT CTACCTGCCG CGCTATCATG GCGTGGCGGC GGAACGGAAC
GCCGACGCCG CCGACCGGGC CGCGCGGCCC AAGGTCGGGT CGCTCTCGAT CCTGCTGGTC
GAGGACGATC CCCGCGTCCA GGCGTCGACC CGCGCGGGGC TGACCGAGCT CGGCCACATC
GTCCGCGCCT GCGCCTCGGG CGAGGAGGCG CTGGCGATGC TGGCGGAGGA TGGCGGCGTC
GACCTCGTCC TGACCGACGT GATGATGCCG GGGATGACCG GGCCCGAGCT GATCGCCGCG
ATCAGTCGCG ACTATCCCGA GATCGCCGCG CTGTTCGTCA CCGGCTATGT CGGCGAAGCC
GGCCAGAGCG ATGATTTCGC GGGCTATGAG GTGCTCCGCA AGCCCTTCAC CATCGCCGCG
CTCGGCAACG CCGTCGCCCG CGCGATCGAT CGTCGCGGCA AGCCGCCGAC CTCCCAAGCC
GCCTGA
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| Protein sequence | MATFSPDALK RGLSPATQRA LAAAVLALTA LGLLVAVVMM VAQSNAARDD ALRREQHSYD
IMVLTRSLDA SLARSEAALG RYVVNGDRKV GTIYYDEWRR AMSQLRQLDR LVGEQPDQVK
LVRKLEGLAS QRDKELTDAA SFANVGKGWY AIGMFNKAGE SPNVVAISAT LEQIAANERT
RLGVRSEATF FSAERANGFA TLLSVLGLVL MGLAILLGWL VAAAAAQRAH AAEQAEAEAD
RASQLEAAVA ERTRELREAN DRLREESETR VRAEAQLAQA QKMEAVGQLT GGIAHDFNNM
LAVVVGGLDL ARRKIAQRPA EAGVHLDGAM EGADRAAALT RRLLSFARAE PLLPDAVLPA
KLVAGMNVLL DRTLGERVTV QVDTAGAHWP IWADAHQLEN AILNLAVNAR DAMEGAGRLD
ISVADVAVAA GDSADVKPGD YVRISVADTG CGMSPQVLAR AFEPFFTTKP VGKGTGLGLS
QIFGFVRQSH GDVRVDSEVG KGTTISLYLP RYHGVAAERN ADAADRAARP KVGSLSILLV
EDDPRVQAST RAGLTELGHI VRACASGEEA LAMLAEDGGV DLVLTDVMMP GMTGPELIAA
ISRDYPEIAA LFVTGYVGEA GQSDDFAGYE VLRKPFTIAA LGNAVARAID RRGKPPTSQA
A
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