| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3887 |
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| Symbol | |
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| ID | 5200287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4275323 |
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| End bp | 4276306 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640583442 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001264370 |
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| Protein GI | 148556788 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTGG CAGGGGAACT GAGTCGGCAT TCGATCCTGA GCACCACGGA TCTCGATCAT
GCCCGTCACG CCGTCGGCAG GATTTTCTGC CCCCATCGCC TTACGCCGGG CTCCGAGCTG
GGAGAGGGCG TGGTTCGTTT CCATCATGCG CCGGTTCGCG CGCTCTCCGT CAACTGGGTC
GACTATGGCC GGGACGTCGT GATCGACCCG GTGCCCTTCG AGAAATTCTA CCTGTTGCAG
ATCCTCCGCT CGGGCAGTGC GGAGATCGGC TGCAACGGCC GGCGCTTCGC CCTGGCGGCC
GGCGAGGCCA GCCTGCTCAA TCCCGACGAC GAGGTCAGCA TGCGCTGGTC GGGGCATTGC
CATAAGCTGA TCGTCAGGAT CGAGCGCGCC GCGCTCGAGC GTTTTGCCGA GGACTGGTTC
GGCTTCTATC TTCCCGGTCC GCTGAATTTC GAGAATCGTC CGGGCTGGGA AACGCCCGAA
CTCGCGGTCG CGCGCGGCCT GGTCGAGCTG ATCGTGCAGG ACTTCGAGAG CGGCGTCGCG
ACGCTCAGCC ATGCGAAGGC CCAGCGGCAT TTCGAGGAGG CGCTGTTCAC CGCCTTGCTG
ATGAGCCGCC GGCATTCGCT GTCGGGCCAC ATGCAGGCTG GCGCGTCGGT GGTGCCGCGC
GCGGTCAAGC GGGCCGAGGA CTATATCGCC GCGCATGCGG GCGAGGACAT CGGCATCGCC
GACCTCGTCG CCGCGAGCGA AGTGTCGAAT CGGACCCTGT TCGAGAGCTT CCGGCGCTTC
CGCGGCGTCA CGCCGATGCA GTATCTTCGC CGCTACCGGC TCGATCGCGT GCGCGAGGAA
CTGCTCGATC CCGGTTCCGA TGTCTCGGTG ACGGACGTGG CGATGCGCTG GAACTTCGAT
CAGCTCGGGC GCTTCTCGTC CTATTATGCC TCGGTCTTCG GGGAAAAGCC GTCGCAGACG
TTGAGGCGCG GGCGCTCGTC CTAG
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| Protein sequence | MQLAGELSRH SILSTTDLDH ARHAVGRIFC PHRLTPGSEL GEGVVRFHHA PVRALSVNWV
DYGRDVVIDP VPFEKFYLLQ ILRSGSAEIG CNGRRFALAA GEASLLNPDD EVSMRWSGHC
HKLIVRIERA ALERFAEDWF GFYLPGPLNF ENRPGWETPE LAVARGLVEL IVQDFESGVA
TLSHAKAQRH FEEALFTALL MSRRHSLSGH MQAGASVVPR AVKRAEDYIA AHAGEDIGIA
DLVAASEVSN RTLFESFRRF RGVTPMQYLR RYRLDRVREE LLDPGSDVSV TDVAMRWNFD
QLGRFSSYYA SVFGEKPSQT LRRGRSS
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