Gene Swit_3868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3868 
Symbol 
ID5200832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4258258 
End bp4258803 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content72% 
IMG OID640583423 
Product2Fe-2S iron-sulfur cluster binding domain-containing protein 
Protein accessionYP_001264351 
Protein GI148556769 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.505784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGGT TCACCGTCAA CGGCCAGCCG GTGCATTACC GGATGGATCC CGCGACCCCG 
CTGCTGTGGG CGCTGCGCGA CGCTTCCAAT CTCACCGGCA CCAAATATGG CTGCGGCGCC
GGGCTGTGCG GTGCCTGCAC CGTCCATATC GACGGCCAGC CGGTGCGATC CTGCCAGGTC
CCGATCGGAT CGATCGAGGG CAGCTTCGTC ACCACGATCG AGGCGCTGTC GCGCGACCGC
GGCCACCCCG TCCAGCAGGC CTGGGTGGCC GAGAACCTGC CCCAGTGCGG CTATTGCCAG
TCGGGCATGA TCATGGCGGC GGCCGCTCTG CTCGACAAGA ATCGCGATCC CAGCGACGAG
GAGATCGACG CGGCGATGAC CAACATCTGC CGCTGCGGCA CCTATCCGCG CGTCCGCCGC
GCGATCCGGC GCGCCGGCCG GGTGCTGGCC GGCAGCGAGA CGATCGCCGC CGCGCCGCCG
CCCGGAATCG ACCCGGCCGA CGCCGCCCGC GCGGTGCCGG CGCTCGGCGC CAGGCCGGGC
GGCTGA
 
Protein sequence
MTRFTVNGQP VHYRMDPATP LLWALRDASN LTGTKYGCGA GLCGACTVHI DGQPVRSCQV 
PIGSIEGSFV TTIEALSRDR GHPVQQAWVA ENLPQCGYCQ SGMIMAAAAL LDKNRDPSDE
EIDAAMTNIC RCGTYPRVRR AIRRAGRVLA GSETIAAAPP PGIDPADAAR AVPALGARPG
G