Gene Swit_3866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3866 
Symbol 
ID5200830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4256567 
End bp4257019 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content69% 
IMG OID640583421 
ProductMarR family transcriptional regulator 
Protein accessionYP_001264349 
Protein GI148556767 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAAA AGGGCCTCAT CCTCGACCGC TTCATTCCCT ATCGCCTGTC GGTGACGTCG 
AACGTCGTCA GCGACGTGAT CTCGACCGCC TATGAGGCGC TGTTCGGCCT CTCGATCCCC
GAATGGCGGA TCGTCGCGGT GGTGGCGGAG CAGGACGGCA TCACCCAGCA GGGCGTCTGC
ATCGCCACCC GGATGGACAA GGTGACGGTG AGCCGCGCGA CGATCGCGCT GGTCGATCGC
GGGCTGATCA CCCGCGCGCC CAACCGGGCC GACCGGCGCT CGCGGCTGCT GGCGCTGTCG
GAGGCGGGGC GGCGGCTCTA CGCCGACGTC GCCCCCAAGG CGATCGAGTT CGAGGAGCGC
ATCTTCTCGA TCTTCCCGGC CGAGGAGCTC GACCGCTTCA TGGCGATGCT GCGCGCGATC
GAGGAGCGGG CGCTGGAGGT CGGCACGCTC TGA
 
Protein sequence
MSQKGLILDR FIPYRLSVTS NVVSDVISTA YEALFGLSIP EWRIVAVVAE QDGITQQGVC 
IATRMDKVTV SRATIALVDR GLITRAPNRA DRRSRLLALS EAGRRLYADV APKAIEFEER
IFSIFPAEEL DRFMAMLRAI EERALEVGTL