| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3864 |
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| Symbol | |
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| ID | 5199365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4254090 |
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| End bp | 4255418 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640583419 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | YP_001264347 |
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| Protein GI | 148556765 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.412305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACG TCGACCCCGC TCGCGGCTCC ACCGCCGCAA GGCCGGAGGA CATGATGACC
GGTTCCTACA TTCCCGGCTT CGGCAACCAT GTCGCGACCG AGGCGGTTGC CGGCGCGCTG
CCGGTGGGGC GCAACTCGCC GCAGCGCGTG CCCTACGGCC TCTATGCCGA GCAGCTCTCG
GGCAGCGCCT TCACCGCGCC CCGCGCCGAG AACAAGCGGA GCTGGCTCTA CCGGATGCGT
CCGGCCGCCA ACCATCCGCC GTTCAAGGCC TATACCCGGC CGACCGGCCT GCGCCATCGT
CCGTTCGACG AGGCGCCGGC CGATCCCAAC CGGCTGCGCT GGGACCCGCT GCCGCTGCCG
TCCGAGCCGA CCGACTTCAT CGACGGGCTG GTCAGCATCG CCGGCAATGG CGGGATCGGC
GTCCATCTCT ATGCCGCCAA CCGCTCGATG GAGCGCCGCG TCTTCTTCAA TGCCGACGGC
GAGCTGCTGA TCGTTCCCGA ACAGGGCGGC CTGCGGATCG CCACCGAGCT CGGCCTGGTC
GAGGTCGAGC CGCTCCACAT CGCGGTGATC CCGCGCGGCG TCCGCTTCCG GGTCGAGCTG
ACCGGCGACG CGGCGCGCGG CTATGTCTGC GAGAATTACG GCGCGCCCTT CCGCCTGCCC
GACCTCGGCC CGATCGGATC GAACGGCCTC GCCAATCCGC GCGATTTCGA GACGCCGGCC
GCCTGGTTCG AGGATATCGA CGAGCCGACC GAGCTGGTCC AGAAGTTCGA AGGCGCGCTG
TGGTCGACGA CGATCGACCA TTCGCCGCTC GACGTGGTCG CCTGGCACGG CAATCTGGCA
CCCTATCGCT ACGACCTGCG CCGCTTCAAC ACGATCGGCA CGGTCAGCTA CGATCATCCC
GATCCGTCGA TCTTCACGGT GCTGACCTCG CCGTCGGAAG TGGCGGGCAC CGCCAATTGC
GACTTCGTGA TCTTCCCCCC GCGCTGGATG GTCGCCGAGG ACACGTTCCG GCCGCCCTGG
TTCCACCGCA ACGTGATGAG CGAATATATG GGCCTGATCA CCGGCGCCTA TGACGCCAAG
GCGGGCGGCT TCATGCCCGG CGGCGGATCG CTCCACAACC GCATGTCGGG CCACGGCCCC
GACCGCGCGA GCTACGAGAC GGCGATCGCC GCCGATCTCA AGCCGCACAA GATCGACGCC
ACCATGGCCT TCATGTTCGA AAGCCGCTCG GTGCTCCGCC CGACCCGGTT CGCGCTCGAA
AGCCCGCTCG CCCAGCTCGA TTATGACGAT TGCTGGTCGG GCTTCACCAA GGCAAAGCTT
CCCAGATGA
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| Protein sequence | MADVDPARGS TAARPEDMMT GSYIPGFGNH VATEAVAGAL PVGRNSPQRV PYGLYAEQLS
GSAFTAPRAE NKRSWLYRMR PAANHPPFKA YTRPTGLRHR PFDEAPADPN RLRWDPLPLP
SEPTDFIDGL VSIAGNGGIG VHLYAANRSM ERRVFFNADG ELLIVPEQGG LRIATELGLV
EVEPLHIAVI PRGVRFRVEL TGDAARGYVC ENYGAPFRLP DLGPIGSNGL ANPRDFETPA
AWFEDIDEPT ELVQKFEGAL WSTTIDHSPL DVVAWHGNLA PYRYDLRRFN TIGTVSYDHP
DPSIFTVLTS PSEVAGTANC DFVIFPPRWM VAEDTFRPPW FHRNVMSEYM GLITGAYDAK
AGGFMPGGGS LHNRMSGHGP DRASYETAIA ADLKPHKIDA TMAFMFESRS VLRPTRFALE
SPLAQLDYDD CWSGFTKAKL PR
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