| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3860 |
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| Symbol | |
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| ID | 5197980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4246370 |
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| End bp | 4247932 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583415 |
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| Product | integral membrane sensor hybrid histidine kinase |
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| Protein accession | YP_001264343 |
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| Protein GI | 148556761 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAAA CCGTCCGGGA ATTCATCAGC GGCAGCTATG CCCCGCATGG CTATTGCCTG
CTGTGGGATC CCTGGCTGGT ATGGACGATG GCGGTCGCCG ACGCGTTGAT CGCGCTCGCC
TATCTGTCGA TTCCGATCGT GCTCGTCACC TTCGTCCGCA AGCGCCGCGA CGTCGCGTTC
GGCGGCGTCT TCTGGCTGTT CGCGCTGTTC ATCACCGCCT GCGGACTGAC CCATCTGGTG
GGGCTGTGGA ACCTGTGGAA CGGCGCCTAT GCGCTGGAGG CGGTGCTCAA GCTGATCACC
GCCGCCGCCT CGGTGCTGAC CGCGATCGTG CTGTGGCCGC TGCTGCCCAA GGCGATCGCG
CTGCCCTCGC CCGCCCGCCT GCGCGAGGCC AACAAGGCGC TGCGCGCCGA GATCGCCGAA
CGCGAGCGGA CCGAGGCCGC GCTGGTCCAG GCCCGCAAGA TGGAGGCGAT GGGCCAGCTC
ACCGGCGGCA TCGCGCACGA TTTCAACAAT CTTTTGCAGG TCGTGTCGGG CAGCCTCGAC
CTGATCAACA ACCGGGCGGG CGGCGACGAG CGCATCCAGC ATCTCTGCGG CGCAGCGATC
TCGGCGATCG AACGGGGCCG CCGCCTGACC AGCCAGCTCC TGTCCTTCTC GCGCATCCAG
CGCATCGAGC TGCGGCCGAC CCGGATCGCC GACATATTGG CCGGGTTGCG CGAATTGCTG
TCGCGGACGA TCGAGCCCGC GATCCTGCTC GACTTCGACG TCGAAGACGT CCCCGAGGCG
GTGATGGCCG ATCCGGTCCA GCTCGAGCTC GCCCTGCTCA ATCTGGCGAT CAACGCGCGC
GACGCGATGC CCGACGGCGG GCGGCTGACG ATCGCGCTCG ACCGGCAGCG GCTGGAAGGC
CGCGACGACG TGCCCGACGG CGACTATGTC GGCATCACCG TCGCCGACAC CGGAAGCGGG
ATGACGCCCG AGGTGCTGGC CCGCGTGTTC GAGCCTTTCT TCACCACCAA GCCGGTCGGC
CGCGGATCGG GGCTGGGGCT GAGCATGGTG TTCGGCATGG CGCGCCAGAG CGGCGGCACC
GTCGCGATCG ACTCGCGGCC CGGCCGGGGC AGCACGGTGA CGATCTTCCT GCGCGCCGTC
GAGGAGGTCG CCGAGGACGA GGCCGCGCCG CGCAGCGCGG CGCCCGACGC CGCCGAGACG
ATCGCCGGCC TCAACGTCCT CGTCGTCGAC GACGAGCCGA TCGTGCGCGA GGTCGTCGCC
GACATGCTCG TCGACCTCGG CTGCACGGTG CGGACCGCCG AGAATGGCGA ACGCGCGCTG
GCGATGATCG AGCGCGAGAT ACCGACGGCG ATCCTGCTCG ACTTCGCCAT GCCCGGCATG
AACGGGGCGG AGGTGGCGCG CGCCGCGCTC CAGCGGTGGC CCGACCTCAG GATCGTCTTC
GCCACCGGCT TCGCCCAGTC CGACGCGATC GACGCGGTTC TGGGCGACCG CGCGATCGTG
CTGCGCAAGC CCTTCTCGCC CAACACGCTG GTCCAGGCGC TCCAGTCGGC GATGGTCGCC
TGA
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| Protein sequence | MFETVREFIS GSYAPHGYCL LWDPWLVWTM AVADALIALA YLSIPIVLVT FVRKRRDVAF
GGVFWLFALF ITACGLTHLV GLWNLWNGAY ALEAVLKLIT AAASVLTAIV LWPLLPKAIA
LPSPARLREA NKALRAEIAE RERTEAALVQ ARKMEAMGQL TGGIAHDFNN LLQVVSGSLD
LINNRAGGDE RIQHLCGAAI SAIERGRRLT SQLLSFSRIQ RIELRPTRIA DILAGLRELL
SRTIEPAILL DFDVEDVPEA VMADPVQLEL ALLNLAINAR DAMPDGGRLT IALDRQRLEG
RDDVPDGDYV GITVADTGSG MTPEVLARVF EPFFTTKPVG RGSGLGLSMV FGMARQSGGT
VAIDSRPGRG STVTIFLRAV EEVAEDEAAP RSAAPDAAET IAGLNVLVVD DEPIVREVVA
DMLVDLGCTV RTAENGERAL AMIEREIPTA ILLDFAMPGM NGAEVARAAL QRWPDLRIVF
ATGFAQSDAI DAVLGDRAIV LRKPFSPNTL VQALQSAMVA
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