Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3856 |
Symbol | |
ID | 5197976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 4240706 |
End bp | 4241923 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640583411 |
Product | major facilitator transporter |
Protein accession | YP_001264339 |
Protein GI | 148556757 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.437041 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGCGA TGCTGCTGCT CGCCTATACG CTCAACTTCA TCGACCGGCA GATCATCGGC ATCCTCGCGG TGCCGATCAA GGCCGACCTG TCGCTCAGCG ACGCGCAGCT CGGCCTGATG GGCGGGCTCG CCTTCGCGCT GTTCTACACC GGGCTCGGCA TCCCGATCGC GATGCTCGCC GACCGGCGCG ACCGCTCGCG GATCATGACC GCCGCGCTCG CGATCTGGAG CCTGATGACC GCGCTGTGCG GCTTCGCCCA GAATTTCTGG CAGCTCTTCG CCGCGCGATT GGGCGTCGGC ATCGGCGAGG CGGGCGGCGT CGCCCCCGCC TATACGCTGA TCGCCGACCT CTTCCCGCCC GAGCGGCGCG CCCGCGCGCT GGCGCTCTAT TCGTTCGGCA TCCCGATCGG CAGCGCCACC GGCATCGTCT TCGGCGGGGT GATCGCGACG CTGATCGACT GGCGATCGGC CTTCTTCATC GTCGGCGCGG CCGGGCTGCT GCTCGCCCCG CTGTTCCGCC GCGTCGTCCG CGACCCGCGC GGCGACCGCC CGGCCGCGGG CGCGACGGCG GTCGGCCTCC GCACCGTCAT CGCCACGCTG CTGACCAAGC CGAGCTTCTG GCTGCTCAGC GTCGGCGCGG CCTGTTCGTC GATGATGGGC TATGGCCTGT TCTTCTGGCT GCCGAGCTTC TTCGTGCGCA GCTTCGGGAT CAGCCTGCTC GAAGCCTCAT TGGGCTATGG CGCGATCCTG CTGGTCGCGG GGCTCGCCGG CATCTGGATG GGCGGCGCGC TGTCGGACCG GCTCGCCAGC CGGTCGAAGG CCTATTATGC GCTCGTGCCC GCGCTCGCCT TCGTCGGCAC CCTCCCCTTC TACGCGCTCG GCATCTCGGC CCAATCACTG TTGCTCAGCC TCGCGCTGCT GCTGGTGCCG ACCGCGCTAG GCCTCGTCTG GCTCGGCCCG GTCATCGCGG CGGTGCAGGC GGTGGTCCCG GCGTCGATGC GCTCGACCGC CTCGGCGATC TTCCTGTTCG TCAACAACCT GATCGGGATC GGCATCGGCA CCCCGGCGAT CGGCTGGATC TCCGATCACC TCAAGGCGCA GTACGGCGAG GAGGCGCTGC GCTACGCGAT CCTGTCGGGC ACCGGCTTCT ACGTCCTCGC CACCCTGTTC CTGCTGCTCG CCGCCTGGCG CCTGCCGCGC GACTGGCACC AGGGCTGA
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Protein sequence | MMAMLLLAYT LNFIDRQIIG ILAVPIKADL SLSDAQLGLM GGLAFALFYT GLGIPIAMLA DRRDRSRIMT AALAIWSLMT ALCGFAQNFW QLFAARLGVG IGEAGGVAPA YTLIADLFPP ERRARALALY SFGIPIGSAT GIVFGGVIAT LIDWRSAFFI VGAAGLLLAP LFRRVVRDPR GDRPAAGATA VGLRTVIATL LTKPSFWLLS VGAACSSMMG YGLFFWLPSF FVRSFGISLL EASLGYGAIL LVAGLAGIWM GGALSDRLAS RSKAYYALVP ALAFVGTLPF YALGISAQSL LLSLALLLVP TALGLVWLGP VIAAVQAVVP ASMRSTASAI FLFVNNLIGI GIGTPAIGWI SDHLKAQYGE EALRYAILSG TGFYVLATLF LLLAAWRLPR DWHQG
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