| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3843 |
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| Symbol | |
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| ID | 5198343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4221533 |
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| End bp | 4222726 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640583398 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001264326 |
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| Protein GI | 148556744 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCG CAGTTCGCGA AGGTTGCTCG ATGATTTCCA ACATGGTGGG CCGCCGTAAC
GGGCTCCTTC TCCTCGTCTG CGCGCTGGTC GCCGGCTGCT CCAAGCAGAA GCCGACGCCG
CCAGCGCCCG AAGCGGGCTT CGTCGTGATG CGCACCGAGT CGGTGCCGCT GTTCATCGAG
CTGCCCGGCC GCACCGCCGC CTTCGAGACA TCCGAGGTCC GCCCGCAGGT GACCGGCGTC
CTCAAGGCAC GGCTGTTCGA GGAAGGCGGC ATCGTCCGCG CCGGGCAGAC GCTCTACCAG
ATCGACCCGA GCCTGTTCCG GGCCTCCGTC AACCAGGCTG CCGCCAATCT CGACAATGCG
CGCGCGCAGC GCCAGGCCGC CGCCGCGCGG GCACAGCGGC TGAAGCCGCT CGCCCAGATC
GAGGCGGTCA GCAAGCAGGA CTATACCGAC GCCGAGGCCG CCGCCCGCCA GGCCGAGGCC
GCGGTCGCGC AGACCGCCGC GCAGCTCGAC ACCGCGCGGA TCAACCTGCG CTTCACCAAC
GTGCCGGCAC CGATCAGCGG ACGGATCGGC CGGTCGCTGG TCACCACCGG CGCGCTCGTC
ACCGCCGGCC AGGCGGAGGC GATGACGACG ATCCAGCGGC TCGACCCGAT CTTCGTCGAC
ATCCAGCAAT CGAGCGCCGA CCTGCTCGCG CTGCGCCGCC AGCTCGCCGC CGGGAGCGGC
ACCGCCTCGT CGGCGACGGT GGGGCTGAAG CTGGAGGACG GCAGCGACTA TCCGATCAAG
GGCCGGCTCG AATTCGCCGA GGCGATGGTC GATCCGCAGA CCGGCACCGT CACGCTGCGC
GCGCGCTTCG CCAATCCCAA CGGCCTGCTG CTGCCCGGCA TGTTCGTCCG CGCCAGCCTG
TCGCAGATCA CCGCGCGCAA CGCGATCCTC GTGCCCCAGA CCGGGGTGAG CCGCGATCCC
AAGGGCCAGG CCACCGTGGT CCTGGTCGGC GCGGGCGACA AGGCCGAGCT GCGCGAGGTC
GTCGCCGACC GGACGGTGGG CGACAAATGG CTGGTGACGT CGGGCCTGAA GCCCGGCGAC
AAGGTGATCG TCGAAGGCCT CGGCAATATC CGGCCCGGCC AGGCGATCCG CCCGGTCCCC
GCCGGTTCGC CGCCGCTGCC GCCCGCAACG GGCGGGCGGG CCAAGGCCGG ATGA
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| Protein sequence | MPAAVREGCS MISNMVGRRN GLLLLVCALV AGCSKQKPTP PAPEAGFVVM RTESVPLFIE
LPGRTAAFET SEVRPQVTGV LKARLFEEGG IVRAGQTLYQ IDPSLFRASV NQAAANLDNA
RAQRQAAAAR AQRLKPLAQI EAVSKQDYTD AEAAARQAEA AVAQTAAQLD TARINLRFTN
VPAPISGRIG RSLVTTGALV TAGQAEAMTT IQRLDPIFVD IQQSSADLLA LRRQLAAGSG
TASSATVGLK LEDGSDYPIK GRLEFAEAMV DPQTGTVTLR ARFANPNGLL LPGMFVRASL
SQITARNAIL VPQTGVSRDP KGQATVVLVG AGDKAELREV VADRTVGDKW LVTSGLKPGD
KVIVEGLGNI RPGQAIRPVP AGSPPLPPAT GGRAKAG
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