| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3838 |
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| Symbol | |
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| ID | 5198195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4213125 |
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| End bp | 4215284 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583393 |
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| Product | malate synthase G |
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| Protein accession | YP_001264321 |
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| Protein GI | 148556739 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2225] Malate synthase |
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| TIGRFAM ID | [TIGR01345] malate synthase G |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.257334 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.113159 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAATGCC GGCTTGCGCT AAGCCCCGCC CATCCATTTT TCGACAGCGA GGCGGCGATG
AGCGACATGA TCGACAGGGC GGGACTCATG GTGGCGGACG CGCTCGTCCG GTTCATCGAG
GATCGCGCGC TGCCCGGCAC CGGGCTGGAC GCCGCGGCCT TCTGGACCGG CGCGGCGGCG
ATCTTCGCGC GCTTCGTCCC GGAGAATCGG GCGCTGCTCG CCACCCGCGA CGATCTCCAG
GCGAAGATCG ACGCCTGGCA CCAGGCGCGC GCCAGCAAGC CGGTCGACCC GGCCGAGTAT
CGGGCGTTCC TGACCGAGAT CGGCTATCTC GTCCCCGAGC CCGCGCCGTT CGCGGTCGGC
ACCGCCAATG TCGATGCCGA GCTGGCGACG ATGGCGGGCC CGCAGCTCGT CGTGCCGATC
CTCAACGCCC GCTTCCTGCT CAACGCCGCC AATGCGCGCT GGGGCAGCCT CTATGATGCG
CTCTACGGCA CCGACGCGAT CCCGGGCGCG GCCGCCGGCA AGGGCTATGA CGCCGCGCGC
GGCGCGCAGG TGATCGCCTG GGCCAAGGGC TTCCTTGACC AGGCGGTGCC GCTGGCGTCG
GGGCGCTGGG CCGACTGGAC GGGCGGCGAC CTCGCGCTCG CCGATCCGGC GCAGCTTGCC
GGCCGCGCGG GCGACAATCT GCTGTTCCGC CACAACGGCC TGCATATCGA GGTGGTGATC
GACCGTGGCC ATGCGATCGG CAAGGACGAT CCCGCCGGGA TCGCCGACGT CATCCTCGAA
TCGGCGCTGA CGACGATCTG CGACCTCGAG GATTCGATCG CGGCGGTCGA CGCCGAGGAC
AAGGTTGCCG CCTATGCCAA CTGGCTCGGC CTGATGAAGG GCGACCTGGA GGACACGTTC
GAGAAGGGCG GGGCGATGAT GACCCGCCGC CTCAACGGGG ACCGCGGCTA CACCGCGCCC
GACGGCGCCG GCTTCACCCT GCCGGGCCGC AGCCTGTTGT TCGTCCGCAA TGTCGGCCAT
CTGATGACGA CTCCGGCGGT GCTGCTCGCT GACGGATCGG AAGCGCCGGA GGGCATCCTC
GACGGCATCG TCACCAGCCT GATCGCGCTG CATGACCTGA AGGGCCTCGG CAGCCACCGC
AACAGCGCCA GGGGCTCGGT CTACATCGTC AAGCCGAAGA TGCACGGGCC GGACGAGGCC
GCTTTCACCA ACCGCCTGTT CGACGCGATC GAGGACCTGC TCGGCATGGC GCGCCACACG
CTCAAGGTCG GCGTGATGGA CGAGGAGCGC CGCACCTCGG CCAACCTCGC CGCCTGCATC
GCGGCGGTGA AGGACCGGAT CATGTTCATC AACACCGGCT TCCTCGATCG CACCGGCGAC
GAGATGCACA CCTCGATGCG GGCCGGTCCG ATGATCCGCA AGGGCGACAT GAAGGCCAGC
GACTGGATCG CCGCCTATGA GGACCGCAAC GTCCAGATCG GCCTCGCCTG CGGACTGTCG
GGCAAGGCGC AGATCGGCAA GGGCATGTGG GCCGCGCCCG ACAAGATGGC CGACATGCTC
GCCCAGAAGA TCGGCCATCC GAAGACCGGC GCCAACACCG CCTGGGTGCC GTCCCCGACC
GCCGCGACGC TGCACGCGAC CCATTATCAC GCGGTCGACG TGTTCGGCCG GCAGGCGGAA
CGCAAGGCCG AGCCGGTCGC GAGCATCGAC CGGCTGCTGG CCATCCCGGT CGCGGCGGGC
AAGAACTGGA GCCCCGACGA GGTCCGCGCC GAGCTCGACA ACAACGCCCA GGGCATCCTC
GGCTATGTCG TCCGCTGGGT CGACCAGGGC GTCGGCTGCT CGAAGGTGCC CGATATCCAC
GACGTCGGCC TGATGGAGGA CCGCGCTACG CTGCGCATCT CGTCGCAGCA CATGGCGAAC
TGGATGCTGC ACGGCGTCGC CACCGCCGAG GAGATCGACG CCGCGCTCAG GCGCATGGCC
GCCAAGGTCG ACGCGCAGAA CGCCGGCGAT CCGCTCTATC GGCCGATGGC CGGGAACGAG
GACCGCAGCC TCGCCTATCA GGCCGCCCGC GCACTGGTGT TCGAGGGCGT CGAGCAGCCC
AACGGCTATA CCGAGCCGCT GCTCCACAGC TTCCGGCAAA AGGTGAAGGC GGCGGCCTGA
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| Protein sequence | MECRLALSPA HPFFDSEAAM SDMIDRAGLM VADALVRFIE DRALPGTGLD AAAFWTGAAA
IFARFVPENR ALLATRDDLQ AKIDAWHQAR ASKPVDPAEY RAFLTEIGYL VPEPAPFAVG
TANVDAELAT MAGPQLVVPI LNARFLLNAA NARWGSLYDA LYGTDAIPGA AAGKGYDAAR
GAQVIAWAKG FLDQAVPLAS GRWADWTGGD LALADPAQLA GRAGDNLLFR HNGLHIEVVI
DRGHAIGKDD PAGIADVILE SALTTICDLE DSIAAVDAED KVAAYANWLG LMKGDLEDTF
EKGGAMMTRR LNGDRGYTAP DGAGFTLPGR SLLFVRNVGH LMTTPAVLLA DGSEAPEGIL
DGIVTSLIAL HDLKGLGSHR NSARGSVYIV KPKMHGPDEA AFTNRLFDAI EDLLGMARHT
LKVGVMDEER RTSANLAACI AAVKDRIMFI NTGFLDRTGD EMHTSMRAGP MIRKGDMKAS
DWIAAYEDRN VQIGLACGLS GKAQIGKGMW AAPDKMADML AQKIGHPKTG ANTAWVPSPT
AATLHATHYH AVDVFGRQAE RKAEPVASID RLLAIPVAAG KNWSPDEVRA ELDNNAQGIL
GYVVRWVDQG VGCSKVPDIH DVGLMEDRAT LRISSQHMAN WMLHGVATAE EIDAALRRMA
AKVDAQNAGD PLYRPMAGNE DRSLAYQAAR ALVFEGVEQP NGYTEPLLHS FRQKVKAAA
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