Gene Swit_3835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3835 
Symbol 
ID5198212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4210169 
End bp4211494 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content76% 
IMG OID640583390 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_001264318 
Protein GI148556736 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0420165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.195306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCCG ATGCGACGAC ATCCGTTGAT CATAACGGCT ATGAAAGGAA GTCGATCCCG 
ATGCGTTTCG GCAAGGCGAT AGTGGCGGCG GCGCTGACCG CGATGGCCGG CACCGCCGTC
GCGCAACTGC TGCCCCCGGT CGGCGGCGCG ATCGGCCAGG CGACGCAGGG CCTCGGCCGG
CTCGGCGAGA CGGTCGGCGA CACGCTGTCC GACACGGTCG ACCGCACCGG CGGACTGGTC
GACCGGCTGG CGCGCCAGCG GATCGTGCGG CTCGACGCGC TGGTGCGGCA GCATCCCGAA
GCGCTGGACA TCGACGCGCG CGGCGATCCG GCGGTGAAGG GCGAACTGAT CCTGGTCGAT
CCCGCGCCCG AGGCGTTGCG GGCCGCCGCC GCCGCCGGCT TCACCCTGGC CGGACAGGAG
GCGATCGACG GCCTCGACAT CCGCGCCGCG CGGCTGCGCA CGCCCGAGGG CATGAGCCTC
GCCCGCGCCG AGCGCCGCCT CCGCCAACTC GCGCCCGGCG CCGAGGTCCA GTCCAACCCC
ATCTATCAGC CGAGCGGCGG CGCGCCGGTC CGGGCGGGCG GCGCCGGCCC AGTCCCATCC
AGCGGTCCCG GCGCGCCGAT CGGCCTAATC GACGGCGGCG TCGCGGCGCA TCCGGCACTG
CCCGCCGGCA TCGTCCAGCG CGGTTTCGCG GCCGGCGCGC CCGCGCCCGG CGACCACGCC
ACCGCGATCG CCTCGATCCT CGTCGGGCGC GGCGCGGTGC GCGGCGTCTC CCCGCAGAGC
CGGCTGCTCG TCGCCGACAT CTTCGGGCGC GACCCGAAGG GCGGCAGCGC GCTCGCCATC
GCCCGCGCGC TCGGCTGGTT CGCGACCAGC GACGTCGCGA TCGTCAACAT CAGCCTCGCC
GGCCCCGACA ATCCGCTGCT CGCCCGCGCG ATCGCCGCCG CCGACCGGCG CGGCATGCTG
ATCGTCGCGG CGGTCGGCAA TGACGGGGCG GCGGCTCCGC CCGCCTATCC CGCCTCCTAT
CCGCAGGTGA TCGCCGTCAC CGGCGTCGAC GCGCGCGGGC GGCCGCTGAT CGAGGCGGGC
AAGGCGCGCC ATCTCGACTT CGCCGCCCCC GGCGCGGGCC TGCGCGCGGC GACCGCCGCC
GGCGGGACGG GAACGGTGCG CGGCACATCC TATGCCGCCC CCTTCGTCGC CGGGCGGCTC
GCCCGGCTGG CGGCGACGGA GCGGCCCGCC CGCGCCCGCG CGATCGCGCT GCTGGCCGCC
GAGGCGCGCG GCAAGGGCCG GCTGACCGGG CGCGGCATCG TCTGTGCTGA CTGCGCAACG
CATTGA
 
Protein sequence
MQPDATTSVD HNGYERKSIP MRFGKAIVAA ALTAMAGTAV AQLLPPVGGA IGQATQGLGR 
LGETVGDTLS DTVDRTGGLV DRLARQRIVR LDALVRQHPE ALDIDARGDP AVKGELILVD
PAPEALRAAA AAGFTLAGQE AIDGLDIRAA RLRTPEGMSL ARAERRLRQL APGAEVQSNP
IYQPSGGAPV RAGGAGPVPS SGPGAPIGLI DGGVAAHPAL PAGIVQRGFA AGAPAPGDHA
TAIASILVGR GAVRGVSPQS RLLVADIFGR DPKGGSALAI ARALGWFATS DVAIVNISLA
GPDNPLLARA IAAADRRGML IVAAVGNDGA AAPPAYPASY PQVIAVTGVD ARGRPLIEAG
KARHLDFAAP GAGLRAATAA GGTGTVRGTS YAAPFVAGRL ARLAATERPA RARAIALLAA
EARGKGRLTG RGIVCADCAT H