| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3830 |
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| Symbol | |
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| ID | 5198375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4205921 |
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| End bp | 4206601 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583385 |
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| Product | import inner membrane translocase, subunit Tim44 |
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| Protein accession | YP_001264313 |
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| Protein GI | 148556731 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4395] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.492338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0940527 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTTTTGGC GGCAGCGTAT TGGAGGCCCG GTGACCACGA TTGTCATTCT TGCGATGGTG
TTTCTCTTCG TCGCGTTCCG CCTGTGGAGC GTGCTGGGCC GTCGCACTGG GCATGAGCAG
ACGATCGCGC GTCCGGCCGA GGCCGCTCCC GCGCCGATCG GCGCCGGCCG GTCGCTGCCC
GAGAACGCCA CCCCCGTCCT GCCGGCCAAG CCCGCCGTGG TCGAGCCGCG CGCCGAAGCC
GGCGTCCGCG CGATCCAGTC GGCCGACGGC GGCTTCGACG CCGCCCAGTT CCTGGAAGGC
GCGCGGTCGG CCTATCGCAT GATCCTCGAA GCCTATTGGC GCGGGGACGA GGAGGCGCTG
CGCCGCCTGA CCGACGACGA CGTCTACGAG GCGTTCGCCG CCGCCATCAC CGAGCGTCGC
GAGGCGAACG AGGTGCTCGA CAACCGGCTG GTGTCGATCG AGAGCGCCGT GATCGAACAG
GCGCGGATGA ACGGGCAGAC CGCCAATGTC ACCGTCCGCT TCGACGCCGA CATCGCCGCC
GTCACCCGCG ACGGCGAGGG CAATGTCGTT GCCGGCTCGC TGACCGACGC GGTTCCGACG
CACGACGTCT GGACCTTCAG CCGGCACGTC CGGTCCGACG ATCCGAACTG GACCCTGGTC
GAAACCGACG AGGCGGCGTG A
|
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| Protein sequence | MFWRQRIGGP VTTIVILAMV FLFVAFRLWS VLGRRTGHEQ TIARPAEAAP APIGAGRSLP
ENATPVLPAK PAVVEPRAEA GVRAIQSADG GFDAAQFLEG ARSAYRMILE AYWRGDEEAL
RRLTDDDVYE AFAAAITERR EANEVLDNRL VSIESAVIEQ ARMNGQTANV TVRFDADIAA
VTRDGEGNVV AGSLTDAVPT HDVWTFSRHV RSDDPNWTLV ETDEAA
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