| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3828 |
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| Symbol | |
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| ID | 5198373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4203473 |
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| End bp | 4205050 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640583383 |
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| Product | integral membrane protein MviN |
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| Protein accession | YP_001264311 |
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| Protein GI | 148556729 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
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| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.831164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0288471 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGC TGCGCGCCAG CGCGACGATC GGCGGGCTGA CGCTGGTCAG CCGGGTGCTC
GGCTTCCTGC GCGACATGCT GATGGCGCGC TTCGTCGGCG CGGGCTTCGC GTCGGACGCC
TTCCTGATCG CCTGGCGCCT GCCCAACCTG TTCCGCGCGC TGTTCGCCGA AGGGGCCTTC
TCCGCCGCCT TCGTGCCGAT GTTCAACCGC ACCGTCGCCG AGGCCGAGGC GAAGGAGCCG
GGCAACGGCC TCGCCATCGC GCTGCGCTTC GCCGAGGACG TGCTGTCGGT CCTCCTCCCC
TTCCTGATCG TCTTCACCGT CGCCATGATG CTGGCGGCGG GGCCGATCGT CTGGGCGATG
ACCGGGGGAT TCCCCGATGG CGGCCCCGAG AAATTCGCGC TGGCGACGCA ATATACGCGG
ATCACCTTTC CCTATCTGAT GCTGATCTCG CTGGTGTCGC TGCTCGGCGG CATCCTCAAT
TCGCTCAACC GCTTCTGGGT CAACGCCGCC GCGCCGATCC TGCTCAACAT CTGCCTGATC
GTCGGCCTGC TGTTCTTCCG CGGCCATAGC GAGGTGGAGA CCGCGCGGAC CCAGGCGATC
GCGGTCACCG TGTCGGGCGC GCTGCAGCTC GCCTGGCTGG TGCTCGCCTG CTGGCAGGCC
GGCGTCCGGC TGCGCGTCCG CCTGCCGCGC CTCAGCCCCG AGGTGCGCAA GCTGCTCGCG
CTGATCGGCC CGGCCGCGAT CGGCGCCGGA GCGGTCCAGT TCAACCTGCT GATCTCGACC
ACGCTCGCCG CCCGCTTCCT GCCGCAGGGG TCGGTCTCCT ACCTCTATTA TGCCGACCGG
CTGAACCAGC TTCCGCTCGG CCTGATCGGC ATCGGCGTCG GCACCGCGAT GCTGCCCAGC
CTGTCGCGCC AGCTGGGCGG CGGCGACGCG AAGGCCGCGC TCGACACGCA GAACCGCGCG
ATCGAGCTGG TGCTGCTGCT CACCCTGCCC GCCACCGCCG CGCTGATGGT GTCGGCGACC
CCGCTGATCC GCGCGCTGCT CCAGCACGGC GTGTTCACGC CGCACGACAC GATCGCCAGC
GCCCGCGCGC TGGCCGCCTT CTCGCTCGGC CTGCCCGCCT ATGTGCTGAT CAAGGTGCTC
ACCCCCGGCT TCTACGCGCG CGCCGACACG AGGACGCCGG TGCGGATCGC GCTGGTGGCG
ATGCTGGTCA ACCTCGTCCT CAACCTCGTC CTGATCTGGC CGCTCGCACA TGTCGGCCTG
GCGCTGTCGA CGGCGATCTC GGCCTGGGTC AACGCGGTGC TGCTCTACGT CACGCTCCGC
CGCCGCGACC ATTTCGCGGT CGACGACCGG CTGCGCCGCA CCGGCATCCG CCTGATCGCG
GCGACGCTGG CGATGGCGGC GCTGCTGTTC CTGCTCAATC CGTGGATCGA TCCGTGGACC
GGCCGCAGCC TGATCGAGCG CGTCGCCGCG CTGGGCGCGA TGATCGCGGC GGCGGTGACC
GTCTATTTCG GCCTGGTCTT CGCCCTCGGC GCCTATTCGC TGGCGACGCT CAAGGGCCAG
CTCCGCCGCC GACGCTGA
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| Protein sequence | MSLLRASATI GGLTLVSRVL GFLRDMLMAR FVGAGFASDA FLIAWRLPNL FRALFAEGAF
SAAFVPMFNR TVAEAEAKEP GNGLAIALRF AEDVLSVLLP FLIVFTVAMM LAAGPIVWAM
TGGFPDGGPE KFALATQYTR ITFPYLMLIS LVSLLGGILN SLNRFWVNAA APILLNICLI
VGLLFFRGHS EVETARTQAI AVTVSGALQL AWLVLACWQA GVRLRVRLPR LSPEVRKLLA
LIGPAAIGAG AVQFNLLIST TLAARFLPQG SVSYLYYADR LNQLPLGLIG IGVGTAMLPS
LSRQLGGGDA KAALDTQNRA IELVLLLTLP ATAALMVSAT PLIRALLQHG VFTPHDTIAS
ARALAAFSLG LPAYVLIKVL TPGFYARADT RTPVRIALVA MLVNLVLNLV LIWPLAHVGL
ALSTAISAWV NAVLLYVTLR RRDHFAVDDR LRRTGIRLIA ATLAMAALLF LLNPWIDPWT
GRSLIERVAA LGAMIAAAVT VYFGLVFALG AYSLATLKGQ LRRRR
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